RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ZKSCAN1P17029 563 aaPredicted RBP10.74□□□□□ -0.69
CIRBP-218ENST00000588344 GTF2A2P52657 109 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 PTH1RQ03431 593 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 PPIL2Q13356 520 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 CCDC178Q5BJE1 867 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CIRBP-218ENST00000588344 ESR2Q92731 530 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 OPTNQ96CV9 577 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 CAPNS2Q96L46 248 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 WDR18Q9BV38 432 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 KRT23Q9C075 422 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 FZD1Q9UP38 647 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 RBM8AQ9Y5S9 174 aaKnown RBP10.74□□□□□ -0.69
CIRBP-218ENST00000588344 SNCAIPQ9Y6H5 919 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 ZHX2Q9Y6X8 837 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 PAPPA2Q9BXP8 1791 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 ECM29Q5VYK3 1845 aa10.74□□□□□ -0.69
CIRBP-218ENST00000588344 FAM196BA6NMK8 535 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 MPHOSPH10O00566 681 aaKnown RBP10.73□□□□□ -0.69
CIRBP-218ENST00000588344 GH2P01242 217 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 RASA1P20936 1047 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 MCCP23508 829 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 SREBF2Q12772 1141 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 SNAPC2Q13487 334 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 KRT32Q14532 448 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 RASAL3Q86YV0 1011 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 ZNF280CQ8ND82 737 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 WNK4Q96J92 1243 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 CLMNQ96JQ2 1002 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 SH2D4AQ9H788 454 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 TOMM22Q9NS69 142 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 ZBTB21Q9ULJ3 1066 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.73□□□□□ -0.69
CIRBP-218ENST00000588344 AFG3L2Q9Y4W6 797 aa10.73□□□□□ -0.69
CIRBP-218ENST00000588344 WDR33Q9C0J8 1336 aaKnown RBP10.73□□□□□ -0.69
CIRBP-218ENST00000588344 TSPY2A6NKD2 308 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 FAM155AB1AL88 458 aaPredicted RBP10.72□□□□□ -0.69
CIRBP-218ENST00000588344 IRF6O14896 467 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 RANBP6O60518 1105 aaKnown RBP10.72□□□□□ -0.69
CIRBP-218ENST00000588344 CYP21A2P08686 494 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TSPY3P0CV98 308 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TSPY8P0CW00 308 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 CETPP11597 493 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 VEGFBP49765 207 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 USP14P54578 494 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 HAND2P61296 217 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TFAP4Q01664 338 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 CTDSPL2Q05D32 466 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 RAB3GAP1Q15042 981 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TSGA10IPQ3SY00 556 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 CYP4F22Q6NT55 531 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 FASTKD5Q7L8L6 764 aaKnown RBP10.72□□□□□ -0.69
CIRBP-218ENST00000588344 IQCA1Q86XH1 822 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 SLC44A5Q8NCS7 719 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 NEDD1Q8NHV4 660 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TTC14Q96N46 770 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 ARHGEF10LQ9HCE6 1279 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TCP11L1Q9NUJ3 509 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 KCNH4Q9UQ05 1017 aa10.72□□□□□ -0.69
CIRBP-218ENST00000588344 MYO5AQ9Y4I1 1855 aaKnown RBP10.72□□□□□ -0.69
CIRBP-218ENST00000588344 TESPA1A2RU30 521 aaPredicted RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 USP17L10C9JJH3 530 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 GDF11O95390 407 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 AKR1B1P15121 316 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 TM4SF4P48230 202 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 MAP2K1Q02750 393 aaPredicted RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 RRP1BQ14684 758 aaKnown RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 CREB3L3Q68CJ9 461 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 RALYLQ86SE5 291 aaKnown RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 STK11IPQ8N1F8 1099 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 DNAJC5GQ8N7S2 189 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 NCOA7Q8NI08 942 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 MTA3Q9BTC8 594 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 USP26Q9BXU7 913 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 ZCCHC17Q9NP64 241 aaKnown RBP10.71□□□□□ -0.69
CIRBP-218ENST00000588344 NYAP2Q9P242 653 aa10.71□□□□□ -0.69
CIRBP-218ENST00000588344 E7EWF7 191 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 SMIM22K7EJ46 135 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 SLC27A2O14975 620 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 PRDM1O75626 825 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 TTLL1O95922 423 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 ALDH1A1P00352 501 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 HSPA4P34932 840 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 BACE1P56817 501 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 HTRA3P83110 453 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 KIF23Q02241 960 aaPredicted RBP10.7□□□□□ -0.7
CIRBP-218ENST00000588344 EVX2Q03828 476 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 SPP2Q13103 211 aa10.7□□□□□ -0.7
CIRBP-218ENST00000588344 PABPC4Q13310 644 aaKnown RBP eCLIP10.7□□□□□ -0.72e-9■□□□□ 10
CIRBP-218ENST00000588344 SEPT2Q15019 361 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms