RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 IFIT3O14879 490 aaKnown RBP13.31□□□□□ -0.28
VMP1-207ENST00000588131 SHMT1P34896 483 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 TFAP4Q01664 338 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 RASA3Q14644 834 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 TMEM67Q5HYA8 995 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
VMP1-207ENST00000588131 CSRNP1Q96S65 589 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 LY9Q9HBG7 655 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
VMP1-207ENST00000588131 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 DAXXQ9UER7 740 aaPredicted RBP13.31□□□□□ -0.28
VMP1-207ENST00000588131 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 BRPF3Q9ULD4 1205 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 ANGEL1Q9UNK9 670 aaKnown RBP13.31□□□□□ -0.28
VMP1-207ENST00000588131 TNKSO95271 1327 aa13.31□□□□□ -0.28
VMP1-207ENST00000588131 WDR90Q96KV7 1748 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 NMT2O60551 498 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 TNNI2P48788 182 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 CUL4AQ13619 759 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 SEC23AQ15436 765 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 FOXP4Q8IVH2 680 aaPredicted RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 CRACR2BQ8N4Y2 399 aaPredicted RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 NECAB1Q8N987 351 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 ZSCAN31Q96LW9 406 aaPredicted RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 ZSCAN10Q96SZ4 725 aaPredicted RBP13.3□□□□□ -0.28
VMP1-207ENST00000588131 UBAC1Q9BSL1 405 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
VMP1-207ENST00000588131 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
VMP1-207ENST00000588131 KLF18A0A0U1RQI7 1052 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 AKR1B1P15121 316 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 EVCP57679 992 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 STK3Q13188 491 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 WTAPQ15007 396 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 ENAHQ8N8S7 591 aaPredicted RBP13.29□□□□□ -0.28
VMP1-207ENST00000588131 TEPSINQ96N21 525 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 MTA3Q9BTC8 594 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
VMP1-207ENST00000588131 IL17RBQ9NRM6 502 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 SCN4AP35499 1836 aa13.29□□□□□ -0.28
VMP1-207ENST00000588131 ERICH2A1L162 156 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 POTECB2RU33 542 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
VMP1-207ENST00000588131 EPHX2P34913 555 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 LIFRP42702 1097 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 NT5C2P49902 561 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 TNFAIP1Q13829 316 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 SART3Q15020 963 aaKnown RBP13.28□□□□□ -0.28
VMP1-207ENST00000588131 RCSD1Q6JBY9 416 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 TATDN1Q6P1N9 297 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 SGMS1Q86VZ5 419 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 IQCA1Q86XH1 822 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 RAB11FIP4Q86YS3 637 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 APOBEC3FQ8IUX4 373 aaKnown RBP13.28□□□□□ -0.28
VMP1-207ENST00000588131 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 NEDD1Q8NHV4 660 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.28□□□□□ -0.28
VMP1-207ENST00000588131 NAP1L2Q9ULW6 460 aaPredicted RBP13.28□□□□□ -0.28
VMP1-207ENST00000588131 HPS5Q9UPZ3 1129 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 UTRNP46939 3433 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 PLIN4Q96Q06 1357 aa13.28□□□□□ -0.28
VMP1-207ENST00000588131 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 PFKFB2O60825 505 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 DTNBO60941 627 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 SCRN1Q12765 414 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
VMP1-207ENST00000588131 SHROOM1Q2M3G4 852 aaPredicted RBP13.27□□□□□ -0.29
VMP1-207ENST00000588131 NFXL1Q6ZNB6 911 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 GTF3C6Q969F1 213 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 ZNF274Q96GC6 653 aaPredicted RBP13.27□□□□□ -0.29
VMP1-207ENST00000588131 MYL10Q9BUA6 226 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 TRIM34Q9BYJ4 488 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 DEFB129Q9H1M3 183 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 TCP11L1Q9NUJ3 509 aa13.27□□□□□ -0.29
VMP1-207ENST00000588131 HERC5Q9UII4 1024 aaKnown RBP13.27□□□□□ -0.29
VMP1-207ENST00000588131 IGKV6D-41A0A0C4DH26 115 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 HSP90AA1P07900 732 aaKnown RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 RXRAP19793 462 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 CCT2P78371 535 aaKnown RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 JAG1P78504 1218 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 IFIT1BQ5T764 474 aaKnown RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 NBPF12Q5TAG4 269 aaPredicted RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 APOA5Q6Q788 366 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 USP50Q70EL3 339 aaPredicted RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 MIGA2Q7L4E1 593 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 PITPNM2Q9BZ72 1349 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 SLKQ9H2G2 1235 aaPredicted RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 TAF1DQ9H5J8 278 aaPredicted RBP13.26□□□□□ -0.29
VMP1-207ENST00000588131 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
VMP1-207ENST00000588131 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
VMP1-207ENST00000588131 MPHOSPH10O00566 681 aaKnown RBP13.25□□□□□ -0.29
VMP1-207ENST00000588131 ZBTB43O43298 467 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms