RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 APBB1O00213 710 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 SH3D19Q5HYK7 790 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 DPF3Q92784 378 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 COA7Q96BR5 231 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 DEFB118Q96PH6 123 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 AS3MTQ9HBK9 375 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 ZBTB21Q9ULJ3 1066 aa18.56■□□□□ 0.56
PRKCSH-204ENST00000587290 ZBED9Q6R2W3 1325 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 FARP2O94887 1054 aaPredicted RBP18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 ASNSP08243 561 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 FXR1P51114 621 aaKnown RBP eCLIP18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 BACE1P56817 501 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 TRIM32Q13049 653 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 IRF5Q13568 498 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 NKX2-3Q8TAU0 364 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 WDR18Q9BV38 432 aa18.55■□□□□ 0.56
PRKCSH-204ENST00000587290 GCLCP48506 637 aaPredicted RBP18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 PXYLP1Q8TE99 480 aa18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 TBC1D2Q9BYX2 928 aa18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 TXNRD2Q9NNW7 524 aa18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 PCDH10Q9P2E7 1040 aa18.54■□□□□ 0.56
PRKCSH-204ENST00000587290 SGPL1O95470 568 aa18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 GH2P01242 217 aa18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 HLA-DOAP06340 250 aa18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 IRX3P78415 501 aaPredicted RBP18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 EVX2Q03828 476 aa18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 PABPC4Q13310 644 aaKnown RBP eCLIP18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 ZYXQ15942 572 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 FOXP4Q8IVH2 680 aaPredicted RBP18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 P2RX7Q99572 595 aaKnown RBP18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 TMOD4Q9NZQ9 345 aa18.53■□□□□ 0.56
PRKCSH-204ENST00000587290 USP5P45974 858 aa18.52■□□□□ 0.56
PRKCSH-204ENST00000587290 GJD2Q9UKL4 321 aa18.52■□□□□ 0.56
PRKCSH-204ENST00000587290 MYH8P13535 1937 aa18.52■□□□□ 0.56
PRKCSH-204ENST00000587290 BAZ2AQ9UIF9 1905 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 USP17L10C9JJH3 530 aa18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 TFRCP02786 760 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 HERVK_113P62684 666 aa18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 POTEEQ6S8J3 1075 aa18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 RHPN1Q8TCX5 695 aa18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 DIS3LQ8TF46 1054 aaKnown RBP18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 PAK6Q9NQU5 681 aaPredicted RBP18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 EMILIN3Q9NT22 766 aa18.51■□□□□ 0.55
PRKCSH-204ENST00000587290 ERC1Q8IUD2 1116 aa18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 PAGR1Q9BTK6 254 aa18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 MORF4L1Q9UBU8 362 aa18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
PRKCSH-204ENST00000587290 MYH7P12883 1935 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 CYP2B6P20813 491 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 HOXA7P31268 230 aaPredicted RBP18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 PLCD1P51178 756 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 MAP3K12Q12852 859 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 SLFNL1Q499Z3 407 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 TRIB2Q92519 343 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 RIOK1Q9BRS2 568 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 HTATIP2Q9BUP3 242 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 PORCNQ9H237 461 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 RBPJLQ9UBG7 517 aa18.49■□□□□ 0.55
PRKCSH-204ENST00000587290 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 HMGCRP04035 888 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 Q3C1V9 767 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 ACER1Q8TDN7 264 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 PAWRQ96IZ0 340 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 DNAJC2Q99543 621 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 FEZ1Q99689 392 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 CRISPLD2Q9H0B8 497 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 SERPINB13Q9UIV8 391 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 LAMA3Q16787 3333 aa18.48■□□□□ 0.55
PRKCSH-204ENST00000587290 FRMPD3Q5JV73 1810 aa18.47■□□□□ 0.55
PRKCSH-204ENST00000587290 GOLIM4O00461 696 aa18.47■□□□□ 0.55
PRKCSH-204ENST00000587290 PDE6AP16499 860 aa18.47■□□□□ 0.55
PRKCSH-204ENST00000587290 SHMT1P34896 483 aa18.47■□□□□ 0.55
PRKCSH-204ENST00000587290 TATDN1Q6P1N9 297 aa18.47■□□□□ 0.55
PRKCSH-204ENST00000587290 MAGEB6P1A0A0J9YX57 407 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 CHGBP05060 677 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 ERVK-24P63145 666 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 SLC9C2Q5TAH2 1124 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 USP17L2Q6R6M4 530 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 GPRC5AQ8NFJ5 357 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 SDR42E1Q8WUS8 393 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 GINM1Q9NU53 330 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 ZNF532Q9HCE3 1301 aa18.46■□□□□ 0.55
PRKCSH-204ENST00000587290 CYP2D6P10635 497 aa18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 CCL14Q16627 93 aa18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 ABCB5Q2M3G0 1257 aa18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 CERKLQ49MI3 558 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 LCORLQ8N3X6 602 aa18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 EHD4Q9H223 541 aa18.45■□□□□ 0.54
PRKCSH-204ENST00000587290 TCRBV5S4A2TA0A5A2 114 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 SMIM22K7EJ46 135 aa18.44■□□□□ 0.54
PRKCSH-204ENST00000587290 IGSF3O75054 1194 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms