RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 TRDNQ13061 729 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 PRKG1Q13976 671 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 PDRG1Q9NUG6 133 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 SWAP70Q9UH65 585 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
NFIX-208ENST00000587260 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
NFIX-208ENST00000587260 DOCK1Q14185 1865 aa17.61■□□□□ 0.41
NFIX-208ENST00000587260 CPA1P15085 419 aa17.61■□□□□ 0.41
NFIX-208ENST00000587260 FOXP4Q8IVH2 680 aaPredicted RBP17.61■□□□□ 0.41
NFIX-208ENST00000587260 KRT23Q9C075 422 aa17.61■□□□□ 0.41
NFIX-208ENST00000587260 ZNF408Q9H9D4 720 aa17.61■□□□□ 0.41
NFIX-208ENST00000587260 GREB1LQ9C091 1923 aaPredicted RBP17.6■□□□□ 0.41
NFIX-208ENST00000587260 TRPM7Q96QT4 1865 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 ORC4O43929 436 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 RANBP6O60518 1105 aaKnown RBP17.6■□□□□ 0.41
NFIX-208ENST00000587260 KDM4AO75164 1064 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 RASA1P20936 1047 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 MCM5P33992 734 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 SUPT20HL1Q3ZLR7 823 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 FAM47AQ5JRC9 791 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 HSCBQ8IWL3 235 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 MTA3Q9BTC8 594 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 AGXT2Q9BYV1 514 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 ZNF287Q9HBT7 754 aa17.6■□□□□ 0.41
NFIX-208ENST00000587260 GDF11O95390 407 aa17.59■□□□□ 0.41
NFIX-208ENST00000587260 SHROOM1Q2M3G4 852 aaPredicted RBP17.59■□□□□ 0.41
NFIX-208ENST00000587260 DCAF15Q66K64 600 aa17.59■□□□□ 0.41
NFIX-208ENST00000587260 CHST3Q7LGC8 479 aa17.59■□□□□ 0.41
NFIX-208ENST00000587260 METTL16Q86W50 562 aaKnown RBP17.59■□□□□ 0.41
NFIX-208ENST00000587260 HOOK2Q96ED9 719 aa17.59■□□□□ 0.41
NFIX-208ENST00000587260 TCEANC2Q96MN5 208 aa17.59■□□□□ 0.41
NFIX-208ENST00000587260 TSPY2A6NKD2 308 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 TBC1D12O60347 775 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 AKR1B1P15121 316 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 NF2P35240 595 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 ANKRD1Q15327 319 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 ZNF444Q8N0Y2 327 aaPredicted RBP17.58■□□□□ 0.41
NFIX-208ENST00000587260 ESR2Q92731 530 aa17.58■□□□□ 0.41
NFIX-208ENST00000587260 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 MPHOSPH10O00566 681 aaKnown RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 AK2P54819 239 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 ANTXR2P58335 489 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 TFAP4Q01664 338 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 RRP1BQ14684 758 aaKnown RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 CERKLQ49MI3 558 aaPredicted RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 TATDN1Q6P1N9 297 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 ZKSCAN3Q9BRR0 538 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 ZNF341Q9BYN7 854 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 TSPY3P0CV98 308 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 TSPY8P0CW00 308 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
NFIX-208ENST00000587260 WRNIP1Q96S55 665 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 LRRC2Q9BYS8 371 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 ZSWIM5Q9P217 1185 aa17.57■□□□□ 0.4
NFIX-208ENST00000587260 PRC1O43663 620 aa17.56■□□□□ 0.4
NFIX-208ENST00000587260 MAP3K10Q02779 954 aa17.56■□□□□ 0.4
NFIX-208ENST00000587260 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
NFIX-208ENST00000587260 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
NFIX-208ENST00000587260 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
NFIX-208ENST00000587260 LIMCH1Q9UPQ0 1083 aa17.56■□□□□ 0.4
NFIX-208ENST00000587260 MYH4Q9Y623 1939 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 PHF20L1A8MW92 1017 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 NMT2O60551 498 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 INPP5BP32019 993 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 EVCP57679 992 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 JAG1P78504 1218 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 ABCB5Q2M3G0 1257 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 Q6ZUG5 572 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 CLEC10AQ8IUN9 316 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
NFIX-208ENST00000587260 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.55■□□□□ 0.4
NFIX-208ENST00000587260 ANGEL1Q9UNK9 670 aaKnown RBP17.55■□□□□ 0.4
NFIX-208ENST00000587260 PLIN4Q96Q06 1357 aa17.54■□□□□ 0.4
NFIX-208ENST00000587260 PPP1R12BO60237 982 aaPredicted RBP17.54■□□□□ 0.4
NFIX-208ENST00000587260 CELF2O95319 508 aaKnown RBP17.54■□□□□ 0.4
NFIX-208ENST00000587260 ITGBL1O95965 494 aaPredicted RBP17.54■□□□□ 0.4
NFIX-208ENST00000587260 GH2P01242 217 aa17.54■□□□□ 0.4
NFIX-208ENST00000587260 ZSCAN31Q96LW9 406 aaPredicted RBP17.54■□□□□ 0.4
NFIX-208ENST00000587260 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
NFIX-208ENST00000587260 TOMM70O94826 608 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 LIFRP42702 1097 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.4
NFIX-208ENST00000587260 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 ZKSCAN4Q969J2 545 aaPredicted RBP17.53■□□□□ 0.4
NFIX-208ENST00000587260 KLRG1Q96E93 195 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 UBAC1Q9BSL1 405 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.53■□□□□ 0.4
NFIX-208ENST00000587260 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
NFIX-208ENST00000587260 ZBTB21Q9ULJ3 1066 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 TNKSO95271 1327 aa17.53■□□□□ 0.4
NFIX-208ENST00000587260 CAP2P40123 477 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 IREB2P48200 963 aaKnown RBP17.52■□□□□ 0.4
NFIX-208ENST00000587260 RAB3GAP1Q15042 981 aa17.52■□□□□ 0.4
NFIX-208ENST00000587260 CCDC84Q86UT8 332 aaPredicted RBP17.52■□□□□ 0.4
NFIX-208ENST00000587260 IQCA1Q86XH1 822 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms