RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 PDAP1Q13442 181 aaKnown RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 TBC1D9Q6ZT07 1266 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 DZIP1Q86YF9 867 aaKnown RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 NKX2-3Q8TAU0 364 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 SMCR8Q8TEV9 937 aaPredicted RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 PAWRQ96IZ0 340 aaKnown RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 MEIS3Q99687 375 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 HTATIP2Q9BUP3 242 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 BACH2Q9BYV9 841 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 ZMYND8Q9ULU4 1186 aaPredicted RBP9.54□□□□□ -0.88
VMP1-204ENST00000587259 MYH2Q9UKX2 1941 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 GAKO14976 1311 aa9.54□□□□□ -0.88
VMP1-204ENST00000587259 SYN1P17600 705 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 PDE4AP27815 886 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 RHBDL3P58872 404 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 MECOMQ03112 1051 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 TFCP2Q12800 502 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 C7orf61Q8IZ16 206 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 IDI2Q9BXS1 227 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 GNL3LQ9NVN8 582 aaKnown RBP9.53□□□□□ -0.88
VMP1-204ENST00000587259 DENND2AQ9ULE3 1009 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 PHIPQ8WWQ0 1821 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 SALL1Q9NSC2 1324 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 DOCK3Q8IZD9 2030 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 COL6A3P12111 3177 aa9.53□□□□□ -0.88
VMP1-204ENST00000587259 PTPRFP10586 1907 aa9.52□□□□□ -0.88
VMP1-204ENST00000587259 ALPK3Q96L96 1907 aa9.52□□□□□ -0.88
VMP1-204ENST00000587259 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.89
VMP1-204ENST00000587259 ENTPD3O75355 529 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 CIAO1O76071 339 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 HMGCS2P54868 508 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 JAG1P78504 1218 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 NUCB1Q02818 461 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 SPP2Q13103 211 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 DOCK1Q14185 1865 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 LCE2DQ5TA82 110 aaPredicted RBP9.52□□□□□ -0.89
VMP1-204ENST00000587259 Q7L0L9 218 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 FASTKD5Q7L8L6 764 aaKnown RBP9.52□□□□□ -0.89
VMP1-204ENST00000587259 CHD1LQ86WJ1 897 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 SLC17A8Q8NDX2 589 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 XAGE2Q96GT9 111 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.52□□□□□ -0.89
VMP1-204ENST00000587259 PAK6Q9NQU5 681 aaPredicted RBP9.52□□□□□ -0.89
VMP1-204ENST00000587259 AGTPBP1Q9UPW5 1226 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 NR2E3Q9Y5X4 410 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 MROH7-TTC4A0A0A0MT08 1334 aa9.52□□□□□ -0.89
VMP1-204ENST00000587259 A0A1B0GUL7 405 aa9.51□□□□□ -0.89
VMP1-204ENST00000587259 DLL1O00548 723 aa9.51□□□□□ -0.89
VMP1-204ENST00000587259 IL15P40933 162 aaPredicted RBP9.51□□□□□ -0.89
VMP1-204ENST00000587259 MAP3K10Q02779 954 aa9.51□□□□□ -0.89
VMP1-204ENST00000587259 CEP85Q6P2H3 762 aa9.51□□□□□ -0.89
VMP1-204ENST00000587259 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.51□□□□□ -0.89
VMP1-204ENST00000587259 UPF2Q9HAU5 1272 aaKnown RBP9.51□□□□□ -0.89
VMP1-204ENST00000587259 HMG20BQ9P0W2 317 aa9.51□□□□□ -0.89
VMP1-204ENST00000587259 SEMA3EO15041 775 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 IRF5Q13568 498 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 PXYLP1Q8TE99 480 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 SH3RF3Q8TEJ3 882 aaPredicted RBP9.5□□□□□ -0.89
VMP1-204ENST00000587259 COA7Q96BR5 231 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 CRISPLD2Q9H0B8 497 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 ASCC2Q9H1I8 757 aaPredicted RBP9.5□□□□□ -0.89
VMP1-204ENST00000587259 DCTPP1Q9H773 170 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 SNRKQ9NRH2 765 aa9.5□□□□□ -0.89
VMP1-204ENST00000587259 A0A0C4DFX4 3053 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 CYP2B6P20813 491 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 FAM110CQ1W6H9 321 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 HSP90AB4PQ58FF6 505 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 PDCD7Q8N8D1 485 aaKnown RBP9.49□□□□□ -0.89
VMP1-204ENST00000587259 TRIB2Q92519 343 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 DDRGK1Q96HY6 314 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 C1orf115Q9H7X2 142 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 TXNRD2Q9NNW7 524 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 RAI14Q9P0K7 980 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 GJD2Q9UKL4 321 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 SLC45A1Q9Y2W3 748 aa9.49□□□□□ -0.89
VMP1-204ENST00000587259 SRGAP3O43295 1099 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 GDF11O95390 407 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 HMGCRP04035 888 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 CAP2P40123 477 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 MCAMP43121 646 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 MTMR2Q13614 643 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 CCL14Q16627 93 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 ANKRD45Q5TZF3 282 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 POTEEQ6S8J3 1075 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 NECAB2Q7Z6G3 386 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 ADGRA1Q86SQ6 560 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 TEX11Q8IYF3 940 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 ZGPATQ8N5A5 531 aaKnown RBP9.48□□□□□ -0.89
VMP1-204ENST00000587259 SPATA5Q8NB90 893 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 ZNF280CQ8ND82 737 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 NSUN4Q96CB9 384 aaKnown RBP9.48□□□□□ -0.89
VMP1-204ENST00000587259 P2RX7Q99572 595 aaKnown RBP9.48□□□□□ -0.89
VMP1-204ENST00000587259 GDF15Q99988 308 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 OSBPL5Q9H0X9 879 aaPredicted RBP9.48□□□□□ -0.89
VMP1-204ENST00000587259 DNAJC18Q9H819 358 aa9.48□□□□□ -0.89
VMP1-204ENST00000587259 NDUFB9Q9Y6M9 179 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms