RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 SPP2Q13103 211 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 KIF22Q14807 665 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 GIMAP6Q6P9H5 292 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 FBXO46Q6PJ61 603 aaPredicted RBP12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 SDR42E1Q8WUS8 393 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 AGTPBP1Q9UPW5 1226 aa12.51□□□□□ -0.41
SMARCA4-209ENST00000586122 PDE1AP54750 535 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 GABPAQ06546 454 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 RRP1BQ14684 758 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 CERKLQ49MI3 558 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 SH3D19Q5HYK7 790 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 TSHZ3Q63HK5 1081 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 OTUD7AQ8TE49 926 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 EVI5LQ96CN4 794 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 FSD1Q9BTV5 496 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 CABP5Q9NP86 173 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 ARPP21Q9UBL0 812 aaPredicted RBP12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 SLC4A4Q9Y6R1 1079 aa12.5□□□□□ -0.41
SMARCA4-209ENST00000586122 ADGRA2Q96PE1 1338 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 PLCD1P51178 756 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 PRMT2P55345 433 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 BACE1P56817 501 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 NUCB1Q02818 461 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 ABCB5Q2M3G0 1257 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 C17orf99Q6UX52 265 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 TMOD4Q9NZQ9 345 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
SMARCA4-209ENST00000586122 USP17L10C9JJH3 530 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 GDF11O95390 407 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 GH2P01242 217 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 SHMT1P34896 483 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 USP14P54578 494 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 LACTBP83111 547 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 SBK1Q52WX2 424 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 C12orf60Q5U649 245 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 SMCR8Q8TEV9 937 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 CCDC17Q96LX7 622 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 LNPKQ9C0E8 428 aa12.48□□□□□ -0.41
SMARCA4-209ENST00000586122 MGAMO43451 1857 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 USP17L12C9JPN9 530 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 USP17L21D6R901 530 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 GPAA1O43292 621 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 PRKAB2O43741 272 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 IGHDP01880 384 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 OSBPP22059 807 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 GCLCP48506 637 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 HMGCS2P54868 508 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 MTMR2Q13614 643 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 SLFNL1Q499Z3 407 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 ZMYM1Q5SVZ6 1142 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 USP17L2Q6R6M4 530 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 TMEM179Q6ZVK1 233 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 OSBP2Q969R2 916 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 NACAP1Q9BZK3 213 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 OSBPL3Q9H4L5 887 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-209ENST00000586122 CCDC85CA6NKD9 419 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 BCRP11274 1271 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 HOXD10P28358 340 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 HOXA7P31268 230 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 C16orf86Q6ZW13 317 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 GTF3C2Q8WUA4 911 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 C12orf42Q96LP6 360 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 FEZ1Q99689 392 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 KIAA1683Q9H0B3 1180 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 CPA4Q9UI42 421 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 HPS5Q9UPZ3 1129 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
SMARCA4-209ENST00000586122 ROBO3Q96MS0 1386 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 GSG1L2A8MUP6 293 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 PATL2C9JE40 543 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 CAPN15O75808 1086 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 CHGBP05060 677 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 CYP2C8P10632 490 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 FCGRTP55899 365 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 IRX3P78415 501 aaPredicted RBP12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 JAG1P78504 1218 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 RAB3GAP1Q15042 981 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 FAM110CQ1W6H9 321 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 TREML2Q5T2D2 321 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 B4GALNT3Q6L9W6 998 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 SH2D4AQ9H788 454 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 HELLSQ9NRZ9 838 aa12.45□□□□□ -0.42
SMARCA4-209ENST00000586122 M0R2C6 588 aa12.44□□□□□ -0.42
SMARCA4-209ENST00000586122 CYP2D6P10635 497 aa12.44□□□□□ -0.42
SMARCA4-209ENST00000586122 TDO2P48775 406 aa12.44□□□□□ -0.42
SMARCA4-209ENST00000586122 CDK8P49336 464 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms