RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ECHDC1Q9NTX5 307 aa21.62■■□□□ 1.05
ERBB2-221ENST00000584888 PALD1Q9ULE6 856 aa21.62■■□□□ 1.05
ERBB2-221ENST00000584888 GABRQQ9UN88 632 aa21.61■■□□□ 1.05
ERBB2-221ENST00000584888 ZNF532Q9HCE3 1301 aa21.6■■□□□ 1.05
ERBB2-221ENST00000584888 HMGCS2P54868 508 aa21.6■■□□□ 1.05
ERBB2-221ENST00000584888 ANKRD13CQ8N6S4 541 aa21.6■■□□□ 1.05
ERBB2-221ENST00000584888 DNAJC18Q9H819 358 aa21.6■■□□□ 1.05
ERBB2-221ENST00000584888 SAP30BPQ9UHR5 308 aaKnown RBP21.6■■□□□ 1.05
ERBB2-221ENST00000584888 PNMA3Q9UL41 463 aa21.6■■□□□ 1.05
ERBB2-221ENST00000584888 MKI67P46013 3256 aaKnown RBP21.6■■□□□ 1.05
ERBB2-221ENST00000584888 JAG1P78504 1218 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 SH3D19Q5HYK7 790 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 CRACR2BQ8N4Y2 399 aaPredicted RBP21.59■■□□□ 1.05
ERBB2-221ENST00000584888 WDR18Q9BV38 432 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 AS3MTQ9HBK9 375 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 BIN2Q9UBW5 565 aaPredicted RBP21.59■■□□□ 1.05
ERBB2-221ENST00000584888 ATAD5Q96QE3 1844 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 BRCA2P51587 3418 aa21.59■■□□□ 1.05
ERBB2-221ENST00000584888 TNPO2O14787 897 aaKnown RBP21.58■■□□□ 1.05
ERBB2-221ENST00000584888 ASNSP08243 561 aa21.58■■□□□ 1.05
ERBB2-221ENST00000584888 ADD2P35612 726 aa21.58■■□□□ 1.05
ERBB2-221ENST00000584888 FLT3LGP49771 235 aa21.58■■□□□ 1.05
ERBB2-221ENST00000584888 TRIM34Q9BYJ4 488 aa21.58■■□□□ 1.05
ERBB2-221ENST00000584888 MAGEB6P1A0A0J9YX57 407 aa21.57■■□□□ 1.04
ERBB2-221ENST00000584888 CCL5P13501 91 aa21.57■■□□□ 1.04
ERBB2-221ENST00000584888 PABPC4Q13310 644 aaKnown RBP eCLIP21.57■■□□□ 1.04
ERBB2-221ENST00000584888 SLFNL1Q499Z3 407 aa21.57■■□□□ 1.04
ERBB2-221ENST00000584888 SLAIN1Q8ND83 568 aa21.57■■□□□ 1.04
ERBB2-221ENST00000584888 SUPT16HQ9Y5B9 1047 aaKnown RBP21.57■■□□□ 1.04
ERBB2-221ENST00000584888 DDX60LQ5H9U9 1706 aaKnown RBP21.57■■□□□ 1.04
ERBB2-221ENST00000584888 SALL3Q9BXA9 1300 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 MGAMO43451 1857 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 ADCY3O60266 1144 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 HLA-DOAP06340 250 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 GCLCP48506 637 aaPredicted RBP21.56■■□□□ 1.04
ERBB2-221ENST00000584888 BACE1P56817 501 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 UBXN2AP68543 259 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 MTMR2Q13614 643 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 UBE3CQ15386 1083 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 FAM110CQ1W6H9 321 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 SHROOM1Q2M3G4 852 aaPredicted RBP21.56■■□□□ 1.04
ERBB2-221ENST00000584888 EXOC6Q8TAG9 804 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
ERBB2-221ENST00000584888 ASCC2Q9H1I8 757 aaPredicted RBP21.56■■□□□ 1.04
ERBB2-221ENST00000584888 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 GDF11O95390 407 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 CHGBP05060 677 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 GJB1P08034 283 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 USP5P45974 858 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 TSHZ3Q63HK5 1081 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 NKX2-3Q8TAU0 364 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 OTUD7AQ8TE49 926 aaPredicted RBP21.55■■□□□ 1.04
ERBB2-221ENST00000584888 SHISA4Q96DD7 197 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.55■■□□□ 1.04
ERBB2-221ENST00000584888 RNF208Q9H0X6 261 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 GINM1Q9NU53 330 aa21.55■■□□□ 1.04
ERBB2-221ENST00000584888 GJA8P48165 433 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 IRF5Q13568 498 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 LCORLQ8N3X6 602 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 COA7Q96BR5 231 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 GPATCH3Q96I76 525 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 CRNKL1Q9BZJ0 848 aaKnown RBP21.54■■□□□ 1.04
ERBB2-221ENST00000584888 TMOD4Q9NZQ9 345 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 ZBTB21Q9ULJ3 1066 aa21.54■■□□□ 1.04
ERBB2-221ENST00000584888 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 C19orf81C9J6K1 198 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 ELNP15502 786 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 KBTBD3Q8NAB2 608 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 PXYLP1Q8TE99 480 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 EHD4Q9H223 541 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 NAV1Q8NEY1 1877 aa21.53■■□□□ 1.04
ERBB2-221ENST00000584888 HOXA7P31268 230 aaPredicted RBP21.52■■□□□ 1.04
ERBB2-221ENST00000584888 ANKRD45Q5TZF3 282 aa21.52■■□□□ 1.04
ERBB2-221ENST00000584888 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
ERBB2-221ENST00000584888 USP17L10C9JJH3 530 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 INHAP05111 366 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 IRX3P78415 501 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-221ENST00000584888 ZSCAN25Q6NSZ9 544 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 TATDN1Q6P1N9 297 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 TTC6Q86TZ1 520 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 SMC5Q8IY18 1101 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 P2RX7Q99572 595 aaKnown RBP21.51■■□□□ 1.03
ERBB2-221ENST00000584888 ARMT1Q9H993 441 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 DCP1AQ9NPI6 582 aaPredicted RBP21.51■■□□□ 1.03
ERBB2-221ENST00000584888 SERPINB13Q9UIV8 391 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 TAOK2Q9UL54 1235 aa21.51■■□□□ 1.03
ERBB2-221ENST00000584888 DOCK3Q8IZD9 2030 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 MBD4O95243 580 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 GH2P01242 217 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 IGHDP01880 384 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 PLCD1P51178 756 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 GABPAQ06546 454 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 PUS7LQ9H0K6 701 aaKnown RBP21.5■■□□□ 1.03
ERBB2-221ENST00000584888 RWDD1Q9H446 243 aaPredicted RBP21.5■■□□□ 1.03
ERBB2-221ENST00000584888 MORF4L1Q9UBU8 362 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 STAP2Q9UGK3 403 aa21.5■■□□□ 1.03
ERBB2-221ENST00000584888 BAZ2AQ9UIF9 1905 aaKnown RBP21.5■■□□□ 1.03
ERBB2-221ENST00000584888 ERC2O15083 957 aa21.49■■□□□ 1.03
ERBB2-221ENST00000584888 PRKAB2O43741 272 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms