RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SPDYE2Q495Y8 402 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 FAM47AQ5JRC9 791 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 ZFPM1Q8IX07 1006 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
UBBP4-202ENST00000584755 IL17RBQ9NRM6 502 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
UBBP4-202ENST00000584755 NAP1L2Q9ULW6 460 aaPredicted RBP16.38■□□□□ 0.21
UBBP4-202ENST00000584755 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
UBBP4-202ENST00000584755 SBF1O95248 1867 aa16.38■□□□□ 0.21
UBBP4-202ENST00000584755 STX6O43752 255 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 HLA-DOAP06340 250 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 CACNB3P54284 484 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 IFIT1BQ5T764 474 aaKnown RBP16.37■□□□□ 0.21
UBBP4-202ENST00000584755 RCSD1Q6JBY9 416 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
UBBP4-202ENST00000584755 DGKHQ86XP1 1220 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 ZNF654Q8IZM8 581 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 NEDD1Q8NHV4 660 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
UBBP4-202ENST00000584755 PTPDC1A2A3K4 754 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 CDC27P30260 824 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 NOVP48745 357 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 NTRK3Q16288 839 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 SYNE3Q6ZMZ3 975 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 SH3BP5LQ7L8J4 393 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
UBBP4-202ENST00000584755 ZNF70Q9UC06 446 aaPredicted RBP16.36■□□□□ 0.21
UBBP4-202ENST00000584755 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 NMT2O60551 498 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 DTNBO60941 627 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 TSPY3P0CV98 308 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 TSPY8P0CW00 308 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 TROAPQ12815 778 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 MYOZ2Q9NPC6 264 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 MTMR6Q9Y217 621 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 KIF3AQ9Y496 699 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 DDTLA6NHG4 134 aaPredicted RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 DDAH1O94760 285 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 ZSCAN22P10073 491 aaPredicted RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 FDPSP14324 419 aaKnown RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 SHMT1P34896 483 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 LARP1BQ659C4 914 aaKnown RBP16.35■□□□□ 0.21
UBBP4-202ENST00000584755 RAB11FIP4Q86YS3 637 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 RGS22Q8NE09 1264 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 MYL10Q9BUA6 226 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 TMOD2Q9NZR1 351 aa16.35■□□□□ 0.21
UBBP4-202ENST00000584755 ZNF541Q9H0D2 1346 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 MYH8P13535 1937 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 IGKV6D-41A0A0C4DH26 115 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 WNT10BO00744 389 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CPLX1O14810 134 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CDKL5O76039 1030 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CALM1P0DP23 149 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CALM2P0DP24 149 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CALM3P0DP25 149 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.211e-7■■□□□ 12.6
UBBP4-202ENST00000584755 RXRAP19793 462 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 GMPSP49915 693 aaPredicted RBP16.34■□□□□ 0.21
UBBP4-202ENST00000584755 TCP10Q12799 353 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 RTN1Q16799 776 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 FAM83AQ86UY5 434 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 FOXP4Q8IVH2 680 aaPredicted RBP16.34■□□□□ 0.21
UBBP4-202ENST00000584755 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 FAM151AQ8WW52 585 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 GBP4Q96PP9 640 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 MAP3K14Q99558 947 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
UBBP4-202ENST00000584755 DNAJC18Q9H819 358 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 CNTNAP1P78357 1384 aa16.34■□□□□ 0.21
UBBP4-202ENST00000584755 SHTN1A0MZ66 631 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 IFNAR1P17181 557 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 MCM4P33991 863 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 TATDN1Q6P1N9 297 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 DDX11Q96FC9 970 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 STK36Q9NRP7 1315 aa16.33■□□□□ 0.2
UBBP4-202ENST00000584755 CLRN2A0PK11 232 aa16.32■□□□□ 0.2
UBBP4-202ENST00000584755 MYO1BO43795 1136 aa16.32■□□□□ 0.2
UBBP4-202ENST00000584755 BAG4O95429 457 aaKnown RBP16.32■□□□□ 0.2
UBBP4-202ENST00000584755 GPC2Q8N158 579 aa16.32■□□□□ 0.2
UBBP4-202ENST00000584755 FAM184AQ8NB25 1140 aa16.32■□□□□ 0.2
UBBP4-202ENST00000584755 CCDC17Q96LX7 622 aa16.32■□□□□ 0.2
UBBP4-202ENST00000584755 RBM28Q9NW13 759 aaKnown RBP16.32■□□□□ 0.2
UBBP4-202ENST00000584755 F13A1P00488 732 aa16.31■□□□□ 0.2
UBBP4-202ENST00000584755 NBPF9Q3BBW0 867 aa16.31■□□□□ 0.2
UBBP4-202ENST00000584755 MICALL2Q8IY33 904 aa16.31■□□□□ 0.2
UBBP4-202ENST00000584755 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
UBBP4-202ENST00000584755 ORC3Q9UBD5 711 aaPredicted RBP16.31■□□□□ 0.2
UBBP4-202ENST00000584755 PGAP2Q9UHJ9 254 aa16.31■□□□□ 0.2
UBBP4-202ENST00000584755 CNOT7Q9UIV1 285 aaKnown RBP16.31■□□□□ 0.2
UBBP4-202ENST00000584755 GJA3Q9Y6H8 435 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms