RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 FRMD4AQ9P2Q2 1039 aaPredicted RBP32.65■■■□□ 2.82
SMARCD2-210ENST00000584400 ZBTB21Q9ULJ3 1066 aa32.65■■■□□ 2.82
SMARCD2-210ENST00000584400 PRKAB2O43741 272 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 GDF11O95390 407 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 GNAT2P19087 354 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 NUCB1Q02818 461 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 CCDC84Q86UT8 332 aaPredicted RBP32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 PROCA1Q8NCQ7 364 aaPredicted RBP32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 EVI5LQ96CN4 794 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 CABP5Q9NP86 173 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 SWAP70Q9UH65 585 aa32.64■■■□□ 2.82
SMARCD2-210ENST00000584400 GPAT2Q6NUI2 795 aa32.63■■■□□ 2.81
SMARCD2-210ENST00000584400 STRBPQ96SI9 672 aaKnown RBP32.63■■■□□ 2.81
SMARCD2-210ENST00000584400 IRX6P78412 446 aaPredicted RBP32.62■■■□□ 2.81
SMARCD2-210ENST00000584400 GABPAQ06546 454 aa32.62■■■□□ 2.81
SMARCD2-210ENST00000584400 OSBP2Q969R2 916 aa32.62■■■□□ 2.81
SMARCD2-210ENST00000584400 AGTPBP1Q9UPW5 1226 aa32.62■■■□□ 2.81
SMARCD2-210ENST00000584400 SIPA1L1O43166 1804 aa32.61■■■□□ 2.81
SMARCD2-210ENST00000584400 PABPC4Q13310 644 aaKnown RBP eCLIP32.61■■■□□ 2.81
SMARCD2-210ENST00000584400 ABCB5Q2M3G0 1257 aa32.61■■■□□ 2.81
SMARCD2-210ENST00000584400 GIMAP6Q6P9H5 292 aa32.61■■■□□ 2.81
SMARCD2-210ENST00000584400 TICAM2Q86XR7 235 aa32.61■■■□□ 2.81
SMARCD2-210ENST00000584400 MYH1P12882 1939 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 C19orf81C9J6K1 198 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 GH2P01242 217 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 KIF22Q14807 665 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 SH3D19Q5HYK7 790 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 ARPP21Q9UBL0 812 aaPredicted RBP32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 PNMA3Q9UL41 463 aa32.6■■■□□ 2.81
SMARCD2-210ENST00000584400 USP17L12C9JPN9 530 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 USP17L21D6R901 530 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 GPAA1O43292 621 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 CAPN15O75808 1086 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 SHMT1P34896 483 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 BACE1P56817 501 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 C12orf60Q5U649 245 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 TMOD4Q9NZQ9 345 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 TRIM17Q9Y577 477 aa32.59■■■□□ 2.81
SMARCD2-210ENST00000584400 USP17L10C9JJH3 530 aa32.58■■■□□ 2.81
SMARCD2-210ENST00000584400 HMGCS2P54868 508 aa32.58■■■□□ 2.81
SMARCD2-210ENST00000584400 CD99L2Q8TCZ2 262 aa32.58■■■□□ 2.81
SMARCD2-210ENST00000584400 MYH7P12883 1935 aa32.57■■■□□ 2.81
SMARCD2-210ENST00000584400 NAV1Q8NEY1 1877 aa32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 JAG1P78504 1218 aa32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 FBXO46Q6PJ61 603 aaPredicted RBP32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 C17orf99Q6UX52 265 aa32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 EFCC1Q9HA90 598 aa32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 DDX60LQ5H9U9 1706 aaKnown RBP32.57■■■□□ 2.8
SMARCD2-210ENST00000584400 CYP2D6P10635 497 aa32.56■■■□□ 2.8
SMARCD2-210ENST00000584400 MTMR2Q13614 643 aa32.56■■■□□ 2.8
SMARCD2-210ENST00000584400 RAB3GAP1Q15042 981 aa32.56■■■□□ 2.8
SMARCD2-210ENST00000584400 SMCR8Q8TEV9 937 aaPredicted RBP32.56■■■□□ 2.8
SMARCD2-210ENST00000584400 ZMYM1Q5SVZ6 1142 aa32.55■■■□□ 2.8
SMARCD2-210ENST00000584400 CTR9Q6PD62 1173 aa32.55■■■□□ 2.8
SMARCD2-210ENST00000584400 OTOP1Q7RTM1 612 aa32.55■■■□□ 2.8
SMARCD2-210ENST00000584400 NACAP1Q9BZK3 213 aa32.55■■■□□ 2.8
SMARCD2-210ENST00000584400 OSBPL3Q9H4L5 887 aa32.55■■■□□ 2.8
SMARCD2-210ENST00000584400 GSG1L2A8MUP6 293 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 M0R2C6 588 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 APPP05067 770 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 CYP2C8P10632 490 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 OSBPP22059 807 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 CPA4Q9UI42 421 aa32.54■■■□□ 2.8
SMARCD2-210ENST00000584400 TRIM6-TRIM34B2RNG4 842 aa32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 PATL2C9JE40 543 aaKnown RBP32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 MPHOSPH10O00566 681 aaKnown RBP32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 GNRH1P01148 92 aa32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 LACTBP83111 547 aaPredicted RBP32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 SBK1Q52WX2 424 aa32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 CCDC17Q96LX7 622 aa32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 FEZ1Q99689 392 aa32.53■■■□□ 2.8
SMARCD2-210ENST00000584400 ADGRA2Q96PE1 1338 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 PHIPQ8WWQ0 1821 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 ATAD5Q96QE3 1844 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 CCDC85CA6NKD9 419 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 TDO2P48775 406 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 USP14P54578 494 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 SHROOM1Q2M3G4 852 aaPredicted RBP32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 TREML2Q5T2D2 321 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 USP17L2Q6R6M4 530 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 PLEKHM2Q8IWE5 1019 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 DYNLL2Q96FJ2 89 aa32.52■■■□□ 2.8
SMARCD2-210ENST00000584400 TMEM179Q6ZVK1 233 aa32.51■■■□□ 2.79
SMARCD2-210ENST00000584400 C16orf86Q6ZW13 317 aa32.51■■■□□ 2.79
SMARCD2-210ENST00000584400 CDK8P49336 464 aa32.5■■■□□ 2.79
SMARCD2-210ENST00000584400 HELLSQ9NRZ9 838 aa32.5■■■□□ 2.79
SMARCD2-210ENST00000584400 HPS5Q9UPZ3 1129 aa32.5■■■□□ 2.79
SMARCD2-210ENST00000584400 CYP2D7A0A087X1C5 515 aa32.49■■■□□ 2.79
SMARCD2-210ENST00000584400 EVX2Q03828 476 aa32.49■■■□□ 2.79
SMARCD2-210ENST00000584400 SLC44A5Q8NCS7 719 aa32.49■■■□□ 2.79
SMARCD2-210ENST00000584400 SEC62Q99442 399 aaKnown RBP32.49■■■□□ 2.79
SMARCD2-210ENST00000584400 ZNF287Q9HBT7 754 aa32.49■■■□□ 2.79
SMARCD2-210ENST00000584400 MINDY4BA8MYZ0 360 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 BCRP11274 1271 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 GCLCP48506 637 aaPredicted RBP32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 IFNL3Q8IZI9 196 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 RILPL2Q969X0 211 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 KIAA1683Q9H0B3 1180 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 PTPN22Q9Y2R2 807 aa32.48■■■□□ 2.79
SMARCD2-210ENST00000584400 HOXA7P31268 230 aaPredicted RBP32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms