RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 SPP2Q13103 211 aa29.91■■■□□ 2.38
TTC39C-209ENST00000584250 PRRT2Q7Z6L0 340 aaPredicted RBP29.91■■■□□ 2.38
TTC39C-209ENST00000584250 GSG1L2A8MUP6 293 aa29.9■■■□□ 2.38
TTC39C-209ENST00000584250 USP17L12C9JPN9 530 aa29.9■■■□□ 2.38
TTC39C-209ENST00000584250 USP17L21D6R901 530 aa29.9■■■□□ 2.38
TTC39C-209ENST00000584250 ZMYM1Q5SVZ6 1142 aa29.9■■■□□ 2.38
TTC39C-209ENST00000584250 ZBTB21Q9ULJ3 1066 aa29.9■■■□□ 2.38
TTC39C-209ENST00000584250 USP17L5A8MUK1 530 aa29.89■■■□□ 2.38
TTC39C-209ENST00000584250 CAP1Q01518 475 aa29.89■■■□□ 2.38
TTC39C-209ENST00000584250 EVI5LQ96CN4 794 aa29.89■■■□□ 2.38
TTC39C-209ENST00000584250 GH2P01242 217 aa29.88■■■□□ 2.37
TTC39C-209ENST00000584250 NOM1Q5C9Z4 860 aaKnown RBP29.88■■■□□ 2.37
TTC39C-209ENST00000584250 IFFO2Q5TF58 517 aa29.88■■■□□ 2.37
TTC39C-209ENST00000584250 CTR9Q6PD62 1173 aa29.88■■■□□ 2.37
TTC39C-209ENST00000584250 GADL1Q6ZQY3 521 aa29.88■■■□□ 2.37
TTC39C-209ENST00000584250 ANKRD23Q86SG2 305 aa29.88■■■□□ 2.37
TTC39C-209ENST00000584250 EPB41L4AQ9HCS5 686 aaPredicted RBP29.88■■■□□ 2.37
TTC39C-209ENST00000584250 PDHXO00330 501 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 ASNSP08243 561 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 C12orf60Q5U649 245 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 CCDC129Q6ZRS4 1044 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 ZNF280CQ8ND82 737 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 OSBPL3Q9H4L5 887 aa29.87■■■□□ 2.37
TTC39C-209ENST00000584250 FKTNO75072 461 aa29.86■■■□□ 2.37
TTC39C-209ENST00000584250 CERKLQ49MI3 558 aaPredicted RBP29.85■■■□□ 2.37
TTC39C-209ENST00000584250 MCOLN1Q9GZU1 580 aa29.85■■■□□ 2.37
TTC39C-209ENST00000584250 ZFYVE28Q9HCC9 887 aa29.85■■■□□ 2.37
TTC39C-209ENST00000584250 TRIM6-TRIM34B2RNG4 842 aa29.84■■■□□ 2.37
TTC39C-209ENST00000584250 GUCY1A2P33402 732 aa29.84■■■□□ 2.37
TTC39C-209ENST00000584250 HMGCS2P54868 508 aa29.84■■■□□ 2.37
TTC39C-209ENST00000584250 LRRFIP1Q32MZ4 808 aaKnown RBP29.84■■■□□ 2.37
TTC39C-209ENST00000584250 TREML2Q5T2D2 321 aa29.84■■■□□ 2.37
TTC39C-209ENST00000584250 ZCCHC17Q9NP64 241 aaKnown RBP29.84■■■□□ 2.37
TTC39C-209ENST00000584250 FOXP2O15409 715 aa29.83■■■□□ 2.37
TTC39C-209ENST00000584250 CYP2C8P10632 490 aa29.83■■■□□ 2.37
TTC39C-209ENST00000584250 RILPL2Q969X0 211 aa29.83■■■□□ 2.37
TTC39C-209ENST00000584250 FAM227BQ96M60 508 aa29.83■■■□□ 2.37
TTC39C-209ENST00000584250 WDR18Q9BV38 432 aa29.83■■■□□ 2.37
TTC39C-209ENST00000584250 MTMR2Q13614 643 aa29.82■■■□□ 2.36
TTC39C-209ENST00000584250 ABCB5Q2M3G0 1257 aa29.82■■■□□ 2.36
TTC39C-209ENST00000584250 FASTKD5Q7L8L6 764 aaKnown RBP29.82■■■□□ 2.36
TTC39C-209ENST00000584250 LOC285556D6RIA3 1793 aa29.82■■■□□ 2.36
TTC39C-209ENST00000584250 ADGRA2Q96PE1 1338 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 ZSWIM8A7E2V4 1837 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 A0A0D9SFI3 127 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 TLR2O60603 784 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 STK11IPQ8N1F8 1099 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 CD99L2Q8TCZ2 262 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 AS3MTQ9HBK9 375 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 CPA4Q9UI42 421 aa29.81■■■□□ 2.36
TTC39C-209ENST00000584250 CDK8P49336 464 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 SEPT2Q15019 361 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 RAB3GAP1Q15042 981 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 CTU1Q7Z7A3 348 aaKnown RBP29.8■■■□□ 2.36
TTC39C-209ENST00000584250 DDRGK1Q96HY6 314 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 GINM1Q9NU53 330 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 MYH8P13535 1937 aa29.8■■■□□ 2.36
TTC39C-209ENST00000584250 PATL2C9JE40 543 aaKnown RBP29.79■■■□□ 2.36
TTC39C-209ENST00000584250 APPP05067 770 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 BACE1P56817 501 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 SP3Q02447 781 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 NMIQ13287 307 aaPredicted RBP29.79■■■□□ 2.36
TTC39C-209ENST00000584250 SH3D19Q5HYK7 790 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 VPS53Q5VIR6 699 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 C16orf86Q6ZW13 317 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 CLEC10AQ8IUN9 316 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 ACER1Q8TDN7 264 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 TBC1D2Q9BYX2 928 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 AGTPBP1Q9UPW5 1226 aa29.79■■■□□ 2.36
TTC39C-209ENST00000584250 MINDY4BA8MYZ0 360 aa29.78■■■□□ 2.36
TTC39C-209ENST00000584250 ECM2O94769 699 aaPredicted RBP29.78■■■□□ 2.36
TTC39C-209ENST00000584250 AKR1B1P15121 316 aa29.78■■■□□ 2.36
TTC39C-209ENST00000584250 SBK1Q52WX2 424 aa29.78■■■□□ 2.36
TTC39C-209ENST00000584250 GIMAP6Q6P9H5 292 aa29.78■■■□□ 2.36
TTC39C-209ENST00000584250 IFNL3Q8IZI9 196 aa29.78■■■□□ 2.36
TTC39C-209ENST00000584250 ARPP21Q9UBL0 812 aaPredicted RBP29.78■■■□□ 2.36
TTC39C-209ENST00000584250 MPHOSPH10O00566 681 aaKnown RBP29.77■■■□□ 2.36
TTC39C-209ENST00000584250 GNAT2P19087 354 aa29.77■■■□□ 2.36
TTC39C-209ENST00000584250 C17orf99Q6UX52 265 aa29.77■■■□□ 2.36
TTC39C-209ENST00000584250 ABHD8Q96I13 439 aa29.77■■■□□ 2.36
TTC39C-209ENST00000584250 SWAP70Q9UH65 585 aa29.77■■■□□ 2.36
TTC39C-209ENST00000584250 USP17L10C9JJH3 530 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 CAPN15O75808 1086 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 GSPT1P15170 499 aaKnown RBP29.76■■■□□ 2.35
TTC39C-209ENST00000584250 TDO2P48775 406 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 ZYXQ15942 572 aaKnown RBP29.76■■■□□ 2.35
TTC39C-209ENST00000584250 AMOTL1Q8IY63 956 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 PROCA1Q8NCQ7 364 aaPredicted RBP29.76■■■□□ 2.35
TTC39C-209ENST00000584250 ARHGAP39Q9C0H5 1083 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 CABP5Q9NP86 173 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 EMILIN3Q9NT22 766 aa29.76■■■□□ 2.35
TTC39C-209ENST00000584250 SDSP20132 328 aa29.75■■■□□ 2.35
TTC39C-209ENST00000584250 ZNF589Q86UQ0 364 aaPredicted RBP29.75■■■□□ 2.35
TTC39C-209ENST00000584250 SKAP1Q86WV1 359 aa29.75■■■□□ 2.35
TTC39C-209ENST00000584250 HELLSQ9NRZ9 838 aa29.75■■■□□ 2.35
TTC39C-209ENST00000584250 PARK7Q99497 189 aaKnown RBP29.74■■■□□ 2.35
TTC39C-209ENST00000584250 A0A1W2PRG0 241 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 CTGFP29279 349 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 OTOP1Q7RTM1 612 aa29.73■■■□□ 2.35
TTC39C-209ENST00000584250 SIAH1Q8IUQ4 282 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms