RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 NKG7Q16617 165 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
TTC39C-208ENST00000584095 ZNF662Q6ZS27 426 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 MCATQ8IVS2 390 aaKnown RBP8.45□□□□□ -1.06
TTC39C-208ENST00000584095 MRPL41Q8IXM3 137 aaKnown RBP8.45□□□□□ -1.06
TTC39C-208ENST00000584095 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 AGGF1Q8N302 714 aaeCLIP8.45□□□□□ -1.06
TTC39C-208ENST00000584095 FAM13CQ8NE31 585 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 TMEM87BQ96K49 555 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 DNAJC7Q99615 494 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 MKL2Q9ULH7 1088 aa8.45□□□□□ -1.06
TTC39C-208ENST00000584095 DDAH1O94760 285 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 HCLS1P14317 486 aaPredicted RBP8.44□□□□□ -1.06
TTC39C-208ENST00000584095 TCEAL1Q15170 157 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 EGFLAMQ63HQ2 1017 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 SHISA2Q6UWI4 295 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 HID1Q8IV36 788 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 ZNF507Q8TCN5 953 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 PUS7Q96PZ0 661 aaKnown RBP8.44□□□□□ -1.06
TTC39C-208ENST00000584095 GSX1Q9H4S2 264 aaPredicted RBP8.44□□□□□ -1.06
TTC39C-208ENST00000584095 SLC12A7Q9Y666 1083 aa8.44□□□□□ -1.06
TTC39C-208ENST00000584095 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-208ENST00000584095 RAG1P15918 1043 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 SLC6A19Q695T7 634 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 DYMQ7RTS9 669 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 LILRB2Q8N423 598 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 C2CD4AQ8NCU7 369 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-208ENST00000584095 ISL2Q96A47 359 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
TTC39C-208ENST00000584095 KANSL2Q9H9L4 492 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 PCDHB10Q9UN67 800 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 ACTL7BQ9Y614 415 aa8.43□□□□□ -1.06
TTC39C-208ENST00000584095 YARSP54577 528 aaKnown RBP8.42□□□□□ -1.06
TTC39C-208ENST00000584095 IFRD2Q12894 506 aaPredicted RBP8.42□□□□□ -1.06
TTC39C-208ENST00000584095 SLBPQ14493 270 aaKnown RBP eCLIP8.42□□□□□ -1.06
TTC39C-208ENST00000584095 GRIK4Q16099 956 aa8.42□□□□□ -1.06
TTC39C-208ENST00000584095 PRRT3Q5FWE3 981 aa8.42□□□□□ -1.06
TTC39C-208ENST00000584095 FDX2Q6P4F2 183 aa8.42□□□□□ -1.06
TTC39C-208ENST00000584095 VHLLQ6RSH7 139 aa8.42□□□□□ -1.06
TTC39C-208ENST00000584095 C12orf50Q8NA57 414 aaPredicted RBP8.42□□□□□ -1.06
TTC39C-208ENST00000584095 PHAXQ9H814 394 aaKnown RBP8.42□□□□□ -1.06
TTC39C-208ENST00000584095 FAM105AQ9NUU6 356 aa8.42□□□□□ -1.06
TTC39C-208ENST00000584095 PIK3R2O00459 728 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 ENPP3O14638 875 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
TTC39C-208ENST00000584095 ANKRD34AQ69YU3 496 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 TMEM130Q8N3G9 435 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 SH3TC2Q8TF17 1288 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 KLHL6Q8WZ60 621 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 KIF2CQ99661 725 aa8.41□□□□□ -1.06
TTC39C-208ENST00000584095 ALX3O95076 343 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 CAP2P40123 477 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 ASPAP45381 313 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 MTERF2Q49AM1 385 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 PRAMEF13Q5VWM6 474 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 CDC37L1Q7L3B6 337 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 PHACTR4Q8IZ21 702 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 KCT2Q8NC54 265 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 PIDD1Q9HB75 910 aa8.4□□□□□ -1.06
TTC39C-208ENST00000584095 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.06
TTC39C-208ENST00000584095 SBNO2Q9Y2G9 1366 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 CNTNAP5Q8WYK1 1306 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 RGS13O14921 159 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 DIAPH1O60610 1272 aaKnown RBP8.39□□□□□ -1.07
TTC39C-208ENST00000584095 RNGTTO60942 597 aaKnown RBP8.39□□□□□ -1.07
TTC39C-208ENST00000584095 UBOX5O94941 541 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 HSD3B2P26439 372 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 PREPP48147 710 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 NCAPHQ15003 741 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 SPATC1Q76KD6 591 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 TMEM192Q8IY95 271 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-208ENST00000584095 AKTIPQ9H8T0 292 aa8.39□□□□□ -1.07
TTC39C-208ENST00000584095 ZNF214Q9UL59 606 aaPredicted RBP8.39□□□□□ -1.07
TTC39C-208ENST00000584095 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.39□□□□□ -1.07
TTC39C-208ENST00000584095 WIPF1O43516 503 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 CST3P01034 146 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-208ENST00000584095 CCNFP41002 786 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 KIAA1211LQ6NV74 962 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 Q6ZS46 218 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 PPFIBP1Q86W92 1011 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 SMYD4Q8IYR2 804 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-208ENST00000584095 BAHD1Q8TBE0 780 aaPredicted RBP8.38□□□□□ -1.07
TTC39C-208ENST00000584095 CYB5D2Q8WUJ1 264 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 SLC6A18Q96N87 628 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 PFDN2Q9UHV9 154 aa8.38□□□□□ -1.07
TTC39C-208ENST00000584095 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 SLC7A5Q01650 507 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 GNPTABQ3T906 1256 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 ARMCX6Q7L4S7 300 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 EEPD1Q7L9B9 569 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
TTC39C-208ENST00000584095 CCDC74BQ96LY2 380 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 FOXQ1Q9C009 403 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 ACSS3Q9H6R3 686 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 ZMYM5Q9UJ78 669 aa8.37□□□□□ -1.07
TTC39C-208ENST00000584095 ESYT3A0FGR9 886 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms