RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 TRIM22Q8IYM9 498 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 RGS22Q8NE09 1264 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 FBXO18Q8NFZ0 1043 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 MASTLQ96GX5 879 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 PGBD1Q96JS3 809 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 ZSCAN10Q96SZ4 725 aaPredicted RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 SLC26A6Q9BXS9 759 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 RBSNQ9H1K0 784 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 NUP62CLQ9H1M0 184 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 CLSTN2Q9H4D0 955 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 GJB4Q9NTQ9 266 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 DDX19AQ9NUU7 478 aaKnown RBP6.4□□□□□ -1.38
CRLF3-204ENST00000583527 MCM9Q9NXL9 1143 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 STK32BQ9NY57 414 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 DAGLAQ9Y4D2 1042 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 ATAD5Q96QE3 1844 aa6.4□□□□□ -1.38
CRLF3-204ENST00000583527 RBBP6Q7Z6E9 1792 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 UBE2Q2LH0YL09 131 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 PLEKHA8P1O95397 391 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 YEATS4O95619 227 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 BAG3O95817 575 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 USP17L8P0C7I0 530 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 IARSP41252 1262 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 NT5C2P49902 561 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 RHBDL3P58872 404 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 PPP4CP60510 307 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 CCDC173Q0VFZ6 552 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 TRIM29Q14134 588 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 EZH2Q15910 746 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 MYSM1Q5VVJ2 828 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 KRT40Q6A162 431 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 ATL3Q6DD88 541 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 STYK1Q6J9G0 422 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 SYNE3Q6ZMZ3 975 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 TMTC3Q6ZXV5 915 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 CATIPQ7Z7H3 387 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 SLC44A5Q8NCS7 719 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 NUP133Q8WUM0 1156 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 WASF1Q92558 559 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 FBXW7Q969H0 707 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 ZNF396Q96N95 335 aaPredicted RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 PHF12Q96QT6 1004 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 CAMKK2Q96RR4 588 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 FUCA2Q9BTY2 467 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 COA1Q9GZY4 146 aa6.39□□□□□ -1.39
CRLF3-204ENST00000583527 TFIP11Q9UBB9 837 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 MKRN1Q9UHC7 482 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 SAP30BPQ9UHR5 308 aaKnown RBP6.39□□□□□ -1.39
CRLF3-204ENST00000583527 GPR75-ASB3A0A0A6YYF3 556 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CCDC196A0A1B0GTZ2 297 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 TSPY2A6NKD2 308 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 RIMBP2O15034 1052 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 NMT2O60551 498 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 DEXIO95424 95 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 LDHCP07864 332 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CALM1P0DP23 149 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CALM2P0DP24 149 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CALM3P0DP25 149 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 PLCG2P16885 1265 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 GUCY1A2P33402 732 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CEBPZQ03701 1054 aaKnown RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 EN1Q05925 392 aaPredicted RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 PDE4BQ07343 736 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 STK38Q15208 465 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 SLC15A2Q16348 729 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 FAM47AQ5JRC9 791 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 C12orf60Q5U649 245 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CCDC73Q6ZRK6 1079 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 RBM43Q6ZSC3 357 aaKnown RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 NBPF11Q86T75 865 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 SLF2Q8IX21 1173 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 MPNDQ8N594 471 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CERS5Q8N5B7 392 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 FSIP1Q8NA03 581 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 RNF214Q8ND24 703 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 KCNG4Q8TDN1 519 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 MRPS27Q92552 414 aaKnown RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 DYNLL2Q96FJ2 89 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 RNF26Q9BY78 433 aaPredicted RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 GOLPH3LQ9H4A5 285 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 RBM28Q9NW13 759 aaKnown RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 DACT1Q9NYF0 836 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 CFAP45Q9UL16 551 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 TAOK2Q9UL54 1235 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 SUGT1Q9Y2Z0 365 aa6.38□□□□□ -1.39
CRLF3-204ENST00000583527 COL2A1P02458 1487 aaPredicted RBP6.38□□□□□ -1.39
CRLF3-204ENST00000583527 NR1I2O75469 434 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 MMP1P03956 469 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 RASA1P20936 1047 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 CHRNA5P30532 468 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 ME1P48163 572 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 GTF2IP78347 998 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 FAM160A1Q05DH4 1040 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 FUT2Q10981 343 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 TROAPQ12815 778 aa6.37□□□□□ -1.39
CRLF3-204ENST00000583527 GNL2Q13823 731 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms