RNA–Protein interactions for RNA: ENST00000583482.6

SPECC1-221, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-221ENST00000583482 ZSCAN29Q8IWY8 852 aaPredicted RBP20.64■□□□□ 0.89
SPECC1-221ENST00000583482 DDX4Q9NQI0 724 aaKnown RBP20.64■□□□□ 0.89
SPECC1-221ENST00000583482 GRXCR1A8MXD5 290 aa20.63■□□□□ 0.89
SPECC1-221ENST00000583482 KIAA0355O15063 1070 aa20.63■□□□□ 0.89
SPECC1-221ENST00000583482 SLC4A2P04920 1241 aa20.63■□□□□ 0.89
SPECC1-221ENST00000583482 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
SPECC1-221ENST00000583482 FPGSQ05932 587 aa20.63■□□□□ 0.89
SPECC1-221ENST00000583482 WDR66Q8TBY9 1149 aa20.63■□□□□ 0.89
SPECC1-221ENST00000583482 FAM196BA6NMK8 535 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 KBTBD13C9JR72 458 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 IGHA2P01877 340 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 CYBAP13498 195 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 ARRDC4Q8NCT1 418 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 EDC3Q96F86 508 aaKnown RBP20.62■□□□□ 0.89
SPECC1-221ENST00000583482 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 TACC3Q9Y6A5 838 aa20.62■□□□□ 0.89
SPECC1-221ENST00000583482 CACNA1FO60840 1977 aa20.61■□□□□ 0.89
SPECC1-221ENST00000583482 CLTBP09497 229 aa20.61■□□□□ 0.89
SPECC1-221ENST00000583482 FKBP5Q13451 457 aaPredicted RBP20.61■□□□□ 0.89
SPECC1-221ENST00000583482 OSBPL5Q9H0X9 879 aaPredicted RBP20.61■□□□□ 0.89
SPECC1-221ENST00000583482 TSPYL2Q9H2G4 693 aaPredicted RBP20.61■□□□□ 0.89
SPECC1-221ENST00000583482 KIF16BQ96L93 1317 aa20.6■□□□□ 0.89
SPECC1-221ENST00000583482 TBC1D12O60347 775 aa20.6■□□□□ 0.89
SPECC1-221ENST00000583482 CYP2C19P33261 490 aa20.6■□□□□ 0.89
SPECC1-221ENST00000583482 ADCYAP1R1P41586 468 aa20.6■□□□□ 0.89
SPECC1-221ENST00000583482 RRP1BQ14684 758 aaKnown RBP20.6■□□□□ 0.89
SPECC1-221ENST00000583482 LRRC24Q50LG9 513 aa20.6■□□□□ 0.89
SPECC1-221ENST00000583482 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.6■□□□□ 0.89
SPECC1-221ENST00000583482 MYBBP1AQ9BQG0 1328 aaKnown RBP20.59■□□□□ 0.89
SPECC1-221ENST00000583482 PDE8BO95263 885 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 RAG1P15918 1043 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 AAK1Q2M2I8 961 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 BEND3Q5T5X7 828 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 RASIP1Q5U651 963 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 FERMT2Q96AC1 680 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 USP34Q70CQ2 3546 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 CFAP54Q96N23 3096 aa20.59■□□□□ 0.89
SPECC1-221ENST00000583482 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 HOXC6P09630 235 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 NHLH1Q02575 133 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 MTMR2Q13614 643 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 METTL24Q5JXM2 366 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 ANO1Q5XXA6 986 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 NPLOC4Q8TAT6 608 aa20.58■□□□□ 0.89
SPECC1-221ENST00000583482 GAKO14976 1311 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 PRRC2BQ5JSZ5 2229 aaKnown RBP20.57■□□□□ 0.88
SPECC1-221ENST00000583482 USP17L5A8MUK1 530 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 ERC2O15083 957 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 FGFR2P21802 821 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
SPECC1-221ENST00000583482 CCAR1Q8IX12 1150 aaKnown RBP20.57■□□□□ 0.88
SPECC1-221ENST00000583482 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
SPECC1-221ENST00000583482 GRM8O00222 908 aa20.56■□□□□ 0.88
SPECC1-221ENST00000583482 LDHBP07195 334 aaKnown RBP20.56■□□□□ 0.88
SPECC1-221ENST00000583482 ZEB1P37275 1124 aaPredicted RBP20.56■□□□□ 0.88
SPECC1-221ENST00000583482 LRRC41Q15345 812 aa20.56■□□□□ 0.88
SPECC1-221ENST00000583482 KAZALD1Q96I82 304 aa20.56■□□□□ 0.88
SPECC1-221ENST00000583482 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.88
SPECC1-221ENST00000583482 TLL1O43897 1013 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 PTPREP23469 700 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 CAP2P40123 477 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 BACE1P56817 501 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 ATP2B2Q01814 1243 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 PICALMQ13492 652 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 C16orf59Q7L2K0 433 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 WDR18Q9BV38 432 aa20.55■□□□□ 0.88
SPECC1-221ENST00000583482 SLC15A5A6NIM6 579 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 PI4K2BG5E9Z4 385 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 CNMDO75829 334 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 MICALL1Q8N3F8 863 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 GTF3C2Q8WUA4 911 aaPredicted RBP20.54■□□□□ 0.88
SPECC1-221ENST00000583482 AS3MTQ9HBK9 375 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 ADAMTS8Q9UP79 889 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 SIPA1L1O43166 1804 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 ZNF236Q9UL36 1845 aa20.54■□□□□ 0.88
SPECC1-221ENST00000583482 F6X3S4 739 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 PQBP1O60828 265 aaKnown RBP20.53■□□□□ 0.88
SPECC1-221ENST00000583482 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
SPECC1-221ENST00000583482 GRB14Q14449 540 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
SPECC1-221ENST00000583482 CWC22Q9HCG8 908 aaKnown RBP20.53■□□□□ 0.88
SPECC1-221ENST00000583482 TMOD4Q9NZQ9 345 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 PHF24Q9UPV7 400 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
SPECC1-221ENST00000583482 PRR33A8MZF0 331 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 SEPT4O43236 478 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 TWISTNBQ3B726 338 aaPredicted RBP20.52■□□□□ 0.88
SPECC1-221ENST00000583482 SUCLG2Q96I99 432 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 NKX2-4Q9H2Z4 354 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 TMEM39AQ9NV64 488 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 SMCHD1A6NHR9 2005 aa20.52■□□□□ 0.88
SPECC1-221ENST00000583482 GLRX3O76003 335 aaKnown RBP20.51■□□□□ 0.87
SPECC1-221ENST00000583482 IFIT1P09914 478 aaKnown RBP20.51■□□□□ 0.87
SPECC1-221ENST00000583482 FAAP100Q0VG06 881 aa20.51■□□□□ 0.87
SPECC1-221ENST00000583482 PUM3Q15397 648 aaKnown RBP20.51■□□□□ 0.87
SPECC1-221ENST00000583482 RAB30Q15771 203 aa20.51■□□□□ 0.87
SPECC1-221ENST00000583482 FAM47AQ5JRC9 791 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms