RNA–Protein interactions for RNA: ENST00000583460.1

LINC00511-216, long intergenic non-protein coding RNA 511, humanhuman

TSL 5

Gene LINC00511, Length 757 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-216ENST00000583460 CRACR2BQ8N4Y2 399 aaPredicted RBP16.05■□□□□ 0.16
LINC00511-216ENST00000583460 SH3RF3Q8TEJ3 882 aaPredicted RBP16.05■□□□□ 0.16
LINC00511-216ENST00000583460 ZNF384Q8TF68 577 aa16.05■□□□□ 0.16
LINC00511-216ENST00000583460 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
LINC00511-216ENST00000583460 C11orf49Q9H6J7 331 aa16.05■□□□□ 0.16
LINC00511-216ENST00000583460 PI4KBQ9UBF8 816 aa16.05■□□□□ 0.16
LINC00511-216ENST00000583460 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
LINC00511-216ENST00000583460 PHIPQ8WWQ0 1821 aa16.04■□□□□ 0.16
LINC00511-216ENST00000583460 SOX1O00570 391 aaPredicted RBP16.04■□□□□ 0.16
LINC00511-216ENST00000583460 SYN1P17600 705 aa16.04■□□□□ 0.16
LINC00511-216ENST00000583460 TTC39AQ5SRH9 613 aa16.04■□□□□ 0.16
LINC00511-216ENST00000583460 NAA16Q6N069 864 aaPredicted RBP16.04■□□□□ 0.16
LINC00511-216ENST00000583460 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
LINC00511-216ENST00000583460 ZBTB40Q9NUA8 1239 aa16.04■□□□□ 0.16
LINC00511-216ENST00000583460 AATFQ9NY61 560 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00511-216ENST00000583460 PTPRFP10586 1907 aa16.04■□□□□ 0.16
LINC00511-216ENST00000583460 GNAI2P04899 355 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 PLCG2P16885 1265 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 ARID4AP29374 1257 aaPredicted RBP16.03■□□□□ 0.16
LINC00511-216ENST00000583460 OS9Q13438 667 aaPredicted RBP16.03■□□□□ 0.16
LINC00511-216ENST00000583460 RRP1BQ14684 758 aaKnown RBP16.03■□□□□ 0.16
LINC00511-216ENST00000583460 SH3D19Q5HYK7 790 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 MAPKAPK5Q8IW41 473 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 GPRC5AQ8NFJ5 357 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 TGFBRAP1Q8WUH2 860 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 P2RX7Q99572 595 aaKnown RBP16.03■□□□□ 0.16
LINC00511-216ENST00000583460 NUDT12Q9BQG2 462 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 SNRKQ9NRH2 765 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 GJD2Q9UKL4 321 aa16.03■□□□□ 0.16
LINC00511-216ENST00000583460 ASNSP08243 561 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 MCAMP43121 646 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 BACE1P56817 501 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 HDAC1Q13547 482 aaPredicted RBP16.02■□□□□ 0.16
LINC00511-216ENST00000583460 CCDC158Q5M9N0 1113 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 WDR18Q9BV38 432 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 MORF4L1Q9UBU8 362 aa16.02■□□□□ 0.16
LINC00511-216ENST00000583460 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.02■□□□□ 0.16
LINC00511-216ENST00000583460 COL2A1P02458 1487 aaPredicted RBP16.02■□□□□ 0.15
LINC00511-216ENST00000583460 CEP290O15078 2479 aa16.02■□□□□ 0.15
LINC00511-216ENST00000583460 C19orf81C9J6K1 198 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 GDF11O95390 407 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
LINC00511-216ENST00000583460 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
LINC00511-216ENST00000583460 MTX1Q13505 466 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 FOXP4Q8IVH2 680 aaPredicted RBP16.01■□□□□ 0.15
LINC00511-216ENST00000583460 SOCS4Q8WXH5 440 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 TRIB2Q92519 343 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 PAGR1Q9BTK6 254 aa16.01■□□□□ 0.15
LINC00511-216ENST00000583460 USP17L10C9JJH3 530 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 PEX10O60683 326 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 HLA-DOAP06340 250 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 MAPK4P31152 587 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 BMP8BP34820 402 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 HERVK_113P62684 666 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
LINC00511-216ENST00000583460 GDF15Q99988 308 aa16■□□□□ 0.15
LINC00511-216ENST00000583460 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
LINC00511-216ENST00000583460 ATAD5Q96QE3 1844 aa15.99■□□□□ 0.15
LINC00511-216ENST00000583460 HOXA7P31268 230 aaPredicted RBP15.99■□□□□ 0.15
LINC00511-216ENST00000583460 UBE2OQ9C0C9 1292 aaKnown RBP15.99■□□□□ 0.15
LINC00511-216ENST00000583460 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
LINC00511-216ENST00000583460 OGDHLQ9ULD0 1010 aa15.99■□□□□ 0.15
LINC00511-216ENST00000583460 PALD1Q9ULE6 856 aa15.99■□□□□ 0.15
LINC00511-216ENST00000583460 LOC285556D6RIA3 1793 aa15.99■□□□□ 0.15
LINC00511-216ENST00000583460 FLT1P17948 1338 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 RGS2P41220 211 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
LINC00511-216ENST00000583460 WDR78Q5VTH9 848 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 DOCK3Q8IZD9 2030 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 DEFB123Q8N688 67 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 GTF3C2Q8WUA4 911 aaPredicted RBP15.98■□□□□ 0.15
LINC00511-216ENST00000583460 FEZ1Q99689 392 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 TXNRD2Q9NNW7 524 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 GINM1Q9NU53 330 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
LINC00511-216ENST00000583460 XRCC5P13010 732 aaKnown RBP15.97■□□□□ 0.15
LINC00511-216ENST00000583460 ERVK-9P63128 1117 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 ERVK-24P63145 666 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 ZYXQ15942 572 aaKnown RBP15.97■□□□□ 0.15
LINC00511-216ENST00000583460 Q3C1V9 767 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 USP17L2Q6R6M4 530 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 GPR142Q7Z601 462 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 PLEKHH3Q7Z736 793 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 DBNDD2Q9BQY9 259 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 RBPJLQ9UBG7 517 aa15.97■□□□□ 0.15
LINC00511-216ENST00000583460 GLRX3O76003 335 aaKnown RBP15.96■□□□□ 0.15
LINC00511-216ENST00000583460 PDE4AP27815 886 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 USP5P45974 858 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 PPP4CP60510 307 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 JAG1P78504 1218 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
LINC00511-216ENST00000583460 SHROOM1Q2M3G4 852 aaPredicted RBP15.96■□□□□ 0.15
LINC00511-216ENST00000583460 TNNI3KQ59H18 835 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 FPGT-TNNI3KV9GXZ4 949 aa15.96■□□□□ 0.15
LINC00511-216ENST00000583460 DDX60LQ5H9U9 1706 aaKnown RBP15.95■□□□□ 0.14
LINC00511-216ENST00000583460 SURF6O75683 361 aaKnown RBP15.95■□□□□ 0.14
LINC00511-216ENST00000583460 GH2P01242 217 aa15.95■□□□□ 0.14
LINC00511-216ENST00000583460 CYP2E1P05181 493 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms