RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PRKCZQ05513 592 aa25.41■■□□□ 1.66
CCDC42-203ENST00000581598 FAM110CQ1W6H9 321 aa25.41■■□□□ 1.66
CCDC42-203ENST00000581598 DDX60LQ5H9U9 1706 aaKnown RBP25.4■■□□□ 1.66
CCDC42-203ENST00000581598 C19orf81C9J6K1 198 aa25.4■■□□□ 1.66
CCDC42-203ENST00000581598 JAG1P78504 1218 aa25.4■■□□□ 1.66
CCDC42-203ENST00000581598 ZBTB21Q9ULJ3 1066 aa25.4■■□□□ 1.66
CCDC42-203ENST00000581598 DOCK3Q8IZD9 2030 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 APBB1O00213 710 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 TATDN1Q6P1N9 297 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 TTC6Q86TZ1 520 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 ANKRD13CQ8N6S4 541 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 SLAIN1Q8ND83 568 aa25.39■■□□□ 1.66
CCDC42-203ENST00000581598 PDE6AP16499 860 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 HOXA7P31268 230 aaPredicted RBP25.38■■□□□ 1.65
CCDC42-203ENST00000581598 IRF5Q13568 498 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 MTMR2Q13614 643 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 ASCC2Q9H1I8 757 aaPredicted RBP25.38■■□□□ 1.65
CCDC42-203ENST00000581598 SERPINB13Q9UIV8 391 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 GABRQQ9UN88 632 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 NAV1Q8NEY1 1877 aa25.38■■□□□ 1.65
CCDC42-203ENST00000581598 TNPO2O14787 897 aaKnown RBP25.37■■□□□ 1.65
CCDC42-203ENST00000581598 GDF11O95390 407 aa25.37■■□□□ 1.65
CCDC42-203ENST00000581598 SLC9C2Q5TAH2 1124 aa25.37■■□□□ 1.65
CCDC42-203ENST00000581598 C20orf194Q5TEA3 1177 aa25.37■■□□□ 1.65
CCDC42-203ENST00000581598 TMOD4Q9NZQ9 345 aa25.37■■□□□ 1.65
CCDC42-203ENST00000581598 MAGEB6P1A0A0J9YX57 407 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 USP17L10C9JJH3 530 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 ATP5JP18859 108 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 UBXN2AP68543 259 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 MTFR1Q15390 333 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 PXYLP1Q8TE99 480 aa25.36■■□□□ 1.65
CCDC42-203ENST00000581598 DNAJC2Q99543 621 aaKnown RBP25.36■■□□□ 1.65
CCDC42-203ENST00000581598 TCRBV5S4A2TA0A5A2 114 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 GOLIM4O00461 696 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 FLT3LGP49771 235 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 SHROOM1Q2M3G4 852 aaPredicted RBP25.35■■□□□ 1.65
CCDC42-203ENST00000581598 NKX2-3Q8TAU0 364 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 COA7Q96BR5 231 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 CRNKL1Q9BZJ0 848 aaKnown RBP25.35■■□□□ 1.65
CCDC42-203ENST00000581598 MORF4L1Q9UBU8 362 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 ZNF532Q9HCE3 1301 aa25.35■■□□□ 1.65
CCDC42-203ENST00000581598 MYCP01106 439 aaPredicted RBP25.34■■□□□ 1.65
CCDC42-203ENST00000581598 PAG1Q9NWQ8 432 aa25.34■■□□□ 1.65
CCDC42-203ENST00000581598 ADCY3O60266 1144 aa25.33■■□□□ 1.65
CCDC42-203ENST00000581598 GH2P01242 217 aa25.33■■□□□ 1.65
CCDC42-203ENST00000581598 GJB1P08034 283 aa25.33■■□□□ 1.65
CCDC42-203ENST00000581598 IRX3P78415 501 aaPredicted RBP25.33■■□□□ 1.65
CCDC42-203ENST00000581598 LRRCC1Q9C099 1032 aa25.33■■□□□ 1.65
CCDC42-203ENST00000581598 MYH7P12883 1935 aa25.33■■□□□ 1.65
CCDC42-203ENST00000581598 CCL5P13501 91 aa25.32■■□□□ 1.64
CCDC42-203ENST00000581598 GJA8P48165 433 aa25.32■■□□□ 1.64
CCDC42-203ENST00000581598 HAUS7Q99871 368 aa25.32■■□□□ 1.64
CCDC42-203ENST00000581598 TAOK2Q9UL54 1235 aa25.32■■□□□ 1.64
CCDC42-203ENST00000581598 PLCD1P51178 756 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 GABPAQ06546 454 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 CERKLQ49MI3 558 aaPredicted RBP25.31■■□□□ 1.64
CCDC42-203ENST00000581598 USP17L2Q6R6M4 530 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 SHISA4Q96DD7 197 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 C12orf42Q96LP6 360 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 BOLA2Q9H3K6 86 aa25.31■■□□□ 1.64
CCDC42-203ENST00000581598 BIN2Q9UBW5 565 aaPredicted RBP25.31■■□□□ 1.64
CCDC42-203ENST00000581598 POLR3DP05423 398 aaPredicted RBP25.3■■□□□ 1.64
CCDC42-203ENST00000581598 CAPN2P17655 700 aa25.3■■□□□ 1.64
CCDC42-203ENST00000581598 SHMT1P34896 483 aa25.3■■□□□ 1.64
CCDC42-203ENST00000581598 GTF3C2Q8WUA4 911 aaPredicted RBP25.3■■□□□ 1.64
CCDC42-203ENST00000581598 EDC3Q96F86 508 aaKnown RBP25.3■■□□□ 1.64
CCDC42-203ENST00000581598 P2RX7Q99572 595 aaKnown RBP25.3■■□□□ 1.64
CCDC42-203ENST00000581598 RNF208Q9H0X6 261 aa25.3■■□□□ 1.64
CCDC42-203ENST00000581598 EMILIN3Q9NT22 766 aa25.3■■□□□ 1.64
CCDC42-203ENST00000581598 SUPT16HQ9Y5B9 1047 aaKnown RBP25.3■■□□□ 1.64
CCDC42-203ENST00000581598 ADD2P35612 726 aa25.29■■□□□ 1.64
CCDC42-203ENST00000581598 HERVK_113P62684 666 aa25.29■■□□□ 1.64
CCDC42-203ENST00000581598 ABCB5Q2M3G0 1257 aa25.29■■□□□ 1.64
CCDC42-203ENST00000581598 LCORLQ8N3X6 602 aa25.29■■□□□ 1.64
CCDC42-203ENST00000581598 GCC1Q96CN9 775 aa25.29■■□□□ 1.64
CCDC42-203ENST00000581598 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.29■■□□□ 1.64
CCDC42-203ENST00000581598 PLXNB2O15031 1838 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 USP14P54578 494 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 KIAA1683Q9H0B3 1180 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 CABP5Q9NP86 173 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 DCP1AQ9NPI6 582 aaPredicted RBP25.28■■□□□ 1.64
CCDC42-203ENST00000581598 MCM9Q9NXL9 1143 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 GJD2Q9UKL4 321 aa25.28■■□□□ 1.64
CCDC42-203ENST00000581598 INHAP05111 366 aa25.27■■□□□ 1.64
CCDC42-203ENST00000581598 ELNP15502 786 aa25.27■■□□□ 1.64
CCDC42-203ENST00000581598 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
CCDC42-203ENST00000581598 UBE3CQ15386 1083 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 UBE2Q1Q7Z7E8 422 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 GPRC5AQ8NFJ5 357 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 SDR42E1Q8WUS8 393 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 BCL11AQ9H165 835 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 UNC93B1Q9H1C4 597 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 DCTPP1Q9H773 170 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 TXNRD2Q9NNW7 524 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 ATP8A2Q9NTI2 1148 aa25.26■■□□□ 1.63
CCDC42-203ENST00000581598 MYH8P13535 1937 aa25.25■■□□□ 1.63
CCDC42-203ENST00000581598 RAB3GAP1Q15042 981 aa25.25■■□□□ 1.63
CCDC42-203ENST00000581598 U2AF1L4Q8WU68 220 aaKnown RBP25.25■■□□□ 1.63
CCDC42-203ENST00000581598 RBPJLQ9UBG7 517 aa25.25■■□□□ 1.63
CCDC42-203ENST00000581598 BAZ2AQ9UIF9 1905 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms