RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 CARD6Q9BX69 1037 aa8.27□□□□□ -1.09
CMTM4-205ENST00000581487 EIF2AQ9BY44 585 aaKnown RBP8.27□□□□□ -1.09
CMTM4-205ENST00000581487 HOXC9P31274 260 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 SLC9C2Q5TAH2 1124 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 LRRC59Q96AG4 307 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 KRT23Q9C075 422 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 RGS12O14924 1447 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 KDM6BO15054 1643 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 E7EVH7 732 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 OPHN1O60890 802 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 UBA7P41226 1012 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 NCBP1Q09161 790 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 PLCB4Q15147 1175 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 OTUD7BQ6GQQ9 843 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 TRIM8Q9BZR9 551 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 ERVK-7P63135 1459 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 MAST1Q9Y2H9 1570 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 HGSO14964 777 aaPredicted RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 STX17P56962 302 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 SKOR1P84550 965 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 ME3Q16798 604 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 RTN1Q16799 776 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 TMTC4Q5T4D3 741 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 BICDL1Q6ZP65 573 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 GEMIN8Q9NWZ8 242 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 PNMA2Q9UL42 364 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 KDM5CP41229 1560 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF263O14978 683 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 FGFR1OPO95684 399 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 IDEP14735 1019 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 SLC4A8Q2Y0W8 1093 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 PATL1Q86TB9 770 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 MKNK2Q9HBH9 465 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 HELLSQ9NRZ9 838 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 SCHIP1Q9P0W5 487 aaPredicted RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 SEC63Q9UGP8 760 aaKnown RBP8.26□□□□□ -1.09
CMTM4-205ENST00000581487 TNRQ92752 1358 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 ZBTB22O15209 634 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 HOXB7P09629 217 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 AFAP1L2Q8N4X5 818 aa8.26□□□□□ -1.09
CMTM4-205ENST00000581487 CYLC1P35663 651 aaPredicted RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 FANCCQ00597 558 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 MCTP2Q6DN12 878 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 RASEFQ8IZ41 740 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 KLHDC4Q8TBB5 520 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SSH3Q8TE77 659 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 PAWRQ96IZ0 340 aaKnown RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 LLPHQ9BRT6 129 aaKnown RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TCP11L1Q9NUJ3 509 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 EDC4Q6P2E9 1401 aaKnown RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 GOLGA6BA6NDN3 693 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TRIM75PA6NK02 468 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 UBXN8O00124 270 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 EFCAB14O75071 495 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 POLD1P28340 1107 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 ALDH3A1P30838 453 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 DPH6Q7L8W6 267 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 DBNDD2Q9BQY9 259 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 CNNM2Q9H8M5 875 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 NCOA5Q9HCD5 579 aaKnown RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 PYCARDQ9ULZ3 195 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 ELP1O95163 1332 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 KDM5DQ9BY66 1539 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 E2F5Q15329 346 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TMEM266Q2M3C6 531 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 CCDC40Q4G0X9 1142 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 RASIP1Q5U651 963 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 RELL1Q8IUW5 271 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SYNPO2Q9UMS6 1093 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 JAK2O60674 1132 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SH3BGRP55822 239 aaPredicted RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 IRX5P78411 483 aaPredicted RBP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 OCRLQ01968 901 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 KIAA0753Q2KHM9 967 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TNNI3KQ59H18 835 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 EFCAB13Q8IY85 973 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 PARD3BQ8TEW8 1205 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SPAG5Q96R06 1193 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 ZNF287Q9HBT7 754 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 FPGT-TNNI3KV9GXZ4 949 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 POLE2P56282 527 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 LRMPQ12912 555 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 MUM1L1Q5H9M0 696 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 ANO1Q5XXA6 986 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TMTC2Q8N394 836 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 RAB34Q9BZG1 259 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 FAM8A1Q9UBU6 413 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 UHRF1BP1LA0JNW5 1464 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 AMPD3Q01432 767 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 CETN1Q12798 172 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 TTC6Q86TZ1 520 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 CABS1Q96KC9 395 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 CCDC138Q96M89 665 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 DDX21Q9NR30 783 aaKnown RBP eCLIP8.25□□□□□ -1.09
CMTM4-205ENST00000581487 MTUS1Q9ULD2 1270 aa8.25□□□□□ -1.09
CMTM4-205ENST00000581487 SPDYE2BA6NHP3 402 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 MYO1BO43795 1136 aa8.24□□□□□ -1.09
CMTM4-205ENST00000581487 SPDYE6P0CI01 402 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms