RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 JAG1P78504 1218 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 CRHR2Q13324 411 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 GIMAP6Q6P9H5 292 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 ANKRD23Q86SG2 305 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 CCDC84Q86UT8 332 aaPredicted RBP17.37■□□□□ 0.37
MKS1-207ENST00000578789 ZBTB21Q9ULJ3 1066 aa17.37■□□□□ 0.37
MKS1-207ENST00000578789 USP17L5A8MUK1 530 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 GDF11O95390 407 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 CYP2D6P10635 497 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 GNAT2P19087 354 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 EVX2Q03828 476 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 TAF1CQ15572 869 aaPredicted RBP17.36■□□□□ 0.37
MKS1-207ENST00000578789 ZNF296Q8WUU4 475 aaPredicted RBP17.36■□□□□ 0.37
MKS1-207ENST00000578789 DDRGK1Q96HY6 314 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 WDR18Q9BV38 432 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 AS3MTQ9HBK9 375 aa17.36■□□□□ 0.37
MKS1-207ENST00000578789 ARPP21Q9UBL0 812 aaPredicted RBP17.36■□□□□ 0.37
MKS1-207ENST00000578789 TRIM75PA6NK02 468 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 GSG1L2A8MUP6 293 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
MKS1-207ENST00000578789 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 FASTKD5Q7L8L6 764 aaKnown RBP17.35■□□□□ 0.37
MKS1-207ENST00000578789 TNS4Q8IZW8 715 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 ZNF280CQ8ND82 737 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
MKS1-207ENST00000578789 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
MKS1-207ENST00000578789 USP17L12C9JPN9 530 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 USP17L21D6R901 530 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 PDE4AP27815 886 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 CERKLQ49MI3 558 aaPredicted RBP17.34■□□□□ 0.37
MKS1-207ENST00000578789 SBK1Q52WX2 424 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 GPAT2Q6NUI2 795 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 CTR9Q6PD62 1173 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 AMOTL1Q8IY63 956 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 ROBO3Q96MS0 1386 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 ZFYVE28Q9HCC9 887 aa17.34■□□□□ 0.37
MKS1-207ENST00000578789 EPB41L4AQ9HCS5 686 aaPredicted RBP17.34■□□□□ 0.37
MKS1-207ENST00000578789 ADGRA2Q96PE1 1338 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 PDHXO00330 501 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 FKTNO75072 461 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 GH2P01242 217 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 SPP2Q13103 211 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 SH3D19Q5HYK7 790 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 PROCA1Q8NCQ7 364 aaPredicted RBP17.33■□□□□ 0.36
MKS1-207ENST00000578789 SLC45A1Q9Y2W3 748 aa17.33■□□□□ 0.36
MKS1-207ENST00000578789 GREB1LQ9C091 1923 aaPredicted RBP17.32■□□□□ 0.36
MKS1-207ENST00000578789 CYP2D7A0A087X1C5 515 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 PATL2C9JE40 543 aaKnown RBP17.32■□□□□ 0.36
MKS1-207ENST00000578789 TLR2O60603 784 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 ABCB5Q2M3G0 1257 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 SLC44A5Q8NCS7 719 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 DYNLL2Q96FJ2 89 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 AGTPBP1Q9UPW5 1226 aa17.32■□□□□ 0.36
MKS1-207ENST00000578789 SMIM22K7EJ46 135 aa17.31■□□□□ 0.36
MKS1-207ENST00000578789 GUCY1A2P33402 732 aa17.31■□□□□ 0.36
MKS1-207ENST00000578789 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
MKS1-207ENST00000578789 CTU1Q7Z7A3 348 aaKnown RBP17.31■□□□□ 0.36
MKS1-207ENST00000578789 PARK7Q99497 189 aaKnown RBP17.31■□□□□ 0.36
MKS1-207ENST00000578789 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 FOXP2O15409 715 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 TDO2P48775 406 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 CDK8P49336 464 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 HMGCS2P54868 508 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 BACE1P56817 501 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 MTMR2Q13614 643 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 CCDC129Q6ZRS4 1044 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 IFNL3Q8IZI9 196 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 CABP5Q9NP86 173 aa17.3■□□□□ 0.36
MKS1-207ENST00000578789 C19orf81C9J6K1 198 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 USP17L10C9JJH3 530 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 SP3Q02447 781 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 DGKZQ13574 1117 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 TTC22Q5TAA0 569 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 ERO1AQ96HE7 468 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 FAM227BQ96M60 508 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 NACAP1Q9BZK3 213 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 MCOLN1Q9GZU1 580 aa17.29■□□□□ 0.36
MKS1-207ENST00000578789 APPP05067 770 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 AKR1B1P15121 316 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 GSPT1P15170 499 aaKnown RBP17.28■□□□□ 0.36
MKS1-207ENST00000578789 SDSP20132 328 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
MKS1-207ENST00000578789 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
MKS1-207ENST00000578789 RAB3GAP1Q15042 981 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 C17orf99Q6UX52 265 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 TMEM179Q6ZVK1 233 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 CCDC17Q96LX7 622 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 ZSWIM8A7E2V4 1837 aa17.28■□□□□ 0.36
MKS1-207ENST00000578789 CYP2C8P10632 490 aa17.27■□□□□ 0.36
MKS1-207ENST00000578789 SEPT2Q15019 361 aa17.27■□□□□ 0.36
MKS1-207ENST00000578789 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.36
MKS1-207ENST00000578789 KIAA1683Q9H0B3 1180 aa17.27■□□□□ 0.36
MKS1-207ENST00000578789 NAPBQ9H115 298 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms