RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 CYFIP1Q7L576 1253 aa7.58□□□□□ -1.2
PTPRM-207ENST00000578571 RNF214Q8ND24 703 aa7.58□□□□□ -1.2
PTPRM-207ENST00000578571 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-207ENST00000578571 STOML1Q9UBI4 398 aa7.58□□□□□ -1.2
PTPRM-207ENST00000578571 ADAMTS1Q9UHI8 967 aa7.58□□□□□ -1.2
PTPRM-207ENST00000578571 LRRIQ1Q96JM4 1722 aa7.58□□□□□ -1.2
PTPRM-207ENST00000578571 ITSN2Q9NZM3 1697 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 CILPO75339 1184 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 NFICP08651 508 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 HCLS1P14317 486 aaPredicted RBP7.57□□□□□ -1.2
PTPRM-207ENST00000578571 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
PTPRM-207ENST00000578571 ZNF394Q53GI3 561 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 FBXL19Q6PCT2 694 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 HDXQ7Z353 690 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 GOLM1Q8NBJ4 401 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 GATAD2BQ8WXI9 593 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 ELMO3Q96BJ8 720 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 SEMA6BQ9H3T3 888 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 PCDHGB7Q9Y5F8 929 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 SNCAIPQ9Y6H5 919 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 CCNB3Q8WWL7 1395 aa7.57□□□□□ -1.2
PTPRM-207ENST00000578571 ABCC10Q5T3U5 1492 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 GLI2P10070 1586 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 CFAP74Q9C0B2 1584 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 LOC100996750A0A140TA64 210 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 FAM95CA0A1B0GW59 222 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 DYNC1LI2O43237 492 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-207ENST00000578571 GREM1O60565 184 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 RACK1P63244 317 aaKnown RBP7.56□□□□□ -1.2
PTPRM-207ENST00000578571 RPL6Q02878 288 aaKnown RBP7.56□□□□□ -1.2
PTPRM-207ENST00000578571 SNAP47Q5SQN1 464 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 ZBTB37Q5TC79 503 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 C9orf131Q5VYM1 1079 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 SEZ6L2Q6UXD5 910 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 SMYD4Q8IYR2 804 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-207ENST00000578571 ISL2Q96A47 359 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 YIPF2Q9BWQ6 316 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 KRTAP4-6Q9BYQ5 205 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 PIDD1Q9HB75 910 aa7.56□□□□□ -1.2
PTPRM-207ENST00000578571 DDX41Q9UJV9 622 aaKnown RBP7.56□□□□□ -1.2
PTPRM-207ENST00000578571 NCOA2Q15596 1464 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 TEX14Q8IWB6 1497 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 FSTP19883 344 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 FAM196AQ6ZSG2 479 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 UBE3DQ7Z6J8 389 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 FBXO27Q8NI29 283 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 ZNF296Q8WUU4 475 aaPredicted RBP7.55□□□□□ -1.2
PTPRM-207ENST00000578571 DAGLAQ9Y4D2 1042 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 ABCA9Q8IUA7 1624 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 MYO5CQ9NQX4 1742 aa7.55□□□□□ -1.2
PTPRM-207ENST00000578571 DIP2BQ9P265 1576 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 ARAP3Q8WWN8 1544 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 PRAMEF27A3QJZ7 478 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 K7ELQ4 463 aaPredicted RBP7.54□□□□□ -1.2
PTPRM-207ENST00000578571 FANCGO15287 622 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 RNGTTO60942 597 aaKnown RBP7.54□□□□□ -1.2
PTPRM-207ENST00000578571 MAP7Q14244 749 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 PAOXQ6QHF9 649 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 NT5DC4Q86YG4 428 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 PRKAG2Q9UGJ0 569 aa7.54□□□□□ -1.2
PTPRM-207ENST00000578571 SUPT16HQ9Y5B9 1047 aaKnown RBP7.54□□□□□ -1.2
PTPRM-207ENST00000578571 CD109Q6YHK3 1445 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 MIA2Q96PC5 1412 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 ARHGAP5Q13017 1502 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 MAGI3Q5TCQ9 1506 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.53□□□□□ -1.2
PTPRM-207ENST00000578571 ADAM23O75077 832 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 NFIAQ12857 509 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 PRSS36Q5K4E3 855 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 EFCAB2Q5VUJ9 269 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 GATA6Q92908 595 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 LRRC3Q9BY71 257 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 WNT10AQ9GZT5 417 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 LGR6Q9HBX8 967 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 PICK1Q9NRD5 415 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 C1GALT1Q9NS00 363 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 CFDP1Q9UEE9 299 aaPredicted RBP7.53□□□□□ -1.2
PTPRM-207ENST00000578571 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 PHLDB1Q86UU1 1377 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 PLEKHH2Q8IVE3 1493 aa7.53□□□□□ -1.2
PTPRM-207ENST00000578571 MYOM3Q5VTT5 1437 aa7.52□□□□□ -1.2
PTPRM-207ENST00000578571 E9PSI1 815 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 IGLV1-40P01703 118 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 TCF3P15923 654 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 ADMP35318 185 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 CRKP46108 304 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 RAD51AP2Q09MP3 1159 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 MPP2Q14168 576 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 SHISA5Q8N114 240 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 FBRSQ9HAH7 460 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 PCOLCE2Q9UKZ9 415 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 PREX2Q70Z35 1606 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 PLCH2O75038 1416 aa7.52□□□□□ -1.21
PTPRM-207ENST00000578571 TTC37Q6PGP7 1564 aa7.51□□□□□ -1.21
PTPRM-207ENST00000578571 TLR3O15455 904 aaKnown RBP7.51□□□□□ -1.21
PTPRM-207ENST00000578571 BPNT1O95861 308 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms