RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 DCP1AQ9NPI6 582 aaPredicted RBP16.44■□□□□ 0.22
CSNK1D-208ENST00000578501 USP17L5A8MUK1 530 aa16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 CHGBP05060 677 aa16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 TAF1CQ15572 869 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 SDR42E1Q8WUS8 393 aa16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 PUS7LQ9H0K6 701 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-208ENST00000578501 H0YGN5 161 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 TLR2O60603 784 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 PLCD1P51178 756 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 PDE1AP54750 535 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 NUCB1Q02818 461 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 GABPAQ06546 454 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 GPAT2Q6NUI2 795 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 APPBP2Q92624 585 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 WDR18Q9BV38 432 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 AS3MTQ9HBK9 375 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 MCM9Q9NXL9 1143 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 SLC45A1Q9Y2W3 748 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 MYH1P12882 1939 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 MYH7P12883 1935 aa16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-208ENST00000578501 PHIPQ8WWQ0 1821 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 TRIM75PA6NK02 468 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 PDHXO00330 501 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 CHD1LQ86WJ1 897 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 TICAM2Q86XR7 235 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 DDRGK1Q96HY6 314 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 STRBPQ96SI9 672 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 LNPKQ9C0E8 428 aa16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-208ENST00000578501 PRKAB2O43741 272 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 SPP2Q13103 211 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 PROCA1Q8NCQ7 364 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 OSBP2Q969R2 916 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 SLC4A4Q9Y6R1 1079 aa16.4■□□□□ 0.22
CSNK1D-208ENST00000578501 DLL1O00548 723 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 SHMT1P34896 483 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 JAG1P78504 1218 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 KIF22Q14807 665 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 SH3D19Q5HYK7 790 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 B4GALNT3Q6L9W6 998 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 CCDC84Q86UT8 332 aaPredicted RBP16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 PARK7Q99497 189 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 FSD1Q9BTV5 496 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 NAV1Q8NEY1 1877 aa16.39■□□□□ 0.21
CSNK1D-208ENST00000578501 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 GDF11O95390 407 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 GNRH1P01148 92 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 GNAT2P19087 354 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 BACE1P56817 501 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 SLC17A8Q8NDX2 589 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 AGTPBP1Q9UPW5 1226 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 ADGRA2Q96PE1 1338 aa16.38■□□□□ 0.21
CSNK1D-208ENST00000578501 MKI67P46013 3256 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 C19orf81C9J6K1 198 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 USP17L12C9JPN9 530 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 USP17L21D6R901 530 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 GPAA1O43292 621 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 GH2P01242 217 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 PRMT2P55345 433 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 ZMYM1Q5SVZ6 1142 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 PTPRFP10586 1907 aa16.37■□□□□ 0.21
CSNK1D-208ENST00000578501 GSG1L2A8MUP6 293 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 CYP2D6P10635 497 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 CAP1Q01518 475 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 ABCB5Q2M3G0 1257 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 SHROOM1Q2M3G4 852 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 SBK1Q52WX2 424 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 CTR9Q6PD62 1173 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 DPF3Q92784 378 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 CABP5Q9NP86 173 aa16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 ARPP21Q9UBL0 812 aaPredicted RBP16.36■□□□□ 0.21
CSNK1D-208ENST00000578501 PATL2C9JE40 543 aaKnown RBP16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 M0R2C6 588 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 HMGCS2P54868 508 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 EVX2Q03828 476 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 MTMR2Q13614 643 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 PLEKHM2Q8IWE5 1019 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 NKX2-3Q8TAU0 364 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
CSNK1D-208ENST00000578501 MYCP01106 439 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-208ENST00000578501 CYP2C8P10632 490 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms