RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 TREML2Q5T2D2 321 aa16.93■□□□□ 0.3
PSMD11-207ENST00000578397 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
PSMD11-207ENST00000578397 SH3TC2Q8TF17 1288 aa16.93■□□□□ 0.3
PSMD11-207ENST00000578397 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
PSMD11-207ENST00000578397 MYPNQ86TC9 1320 aa16.93■□□□□ 0.3
PSMD11-207ENST00000578397 EN2P19622 333 aaPredicted RBP16.92■□□□□ 0.3
PSMD11-207ENST00000578397 GCLCP48506 637 aaPredicted RBP16.92■□□□□ 0.3
PSMD11-207ENST00000578397 HMGCS2P54868 508 aa16.92■□□□□ 0.3
PSMD11-207ENST00000578397 BACE1P56817 501 aa16.92■□□□□ 0.3
PSMD11-207ENST00000578397 TTC6Q86TZ1 520 aa16.92■□□□□ 0.3
PSMD11-207ENST00000578397 EHD4Q9H223 541 aa16.92■□□□□ 0.3
PSMD11-207ENST00000578397 C19orf81C9J6K1 198 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 PDE6AP16499 860 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 GRK4P32298 578 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 SLC9C2Q5TAH2 1124 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
PSMD11-207ENST00000578397 TMOD4Q9NZQ9 345 aa16.91■□□□□ 0.3
PSMD11-207ENST00000578397 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 USP17L10C9JJH3 530 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 GOLIM4O00461 696 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 ATP5JP18859 108 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 JAG1P78504 1218 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 PRKCZQ05513 592 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 ANKRD13CQ8N6S4 541 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
PSMD11-207ENST00000578397 ASCC2Q9H1I8 757 aaPredicted RBP16.9■□□□□ 0.3
PSMD11-207ENST00000578397 SERPINB13Q9UIV8 391 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 ZBTB21Q9ULJ3 1066 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 PHIPQ8WWQ0 1821 aa16.9■□□□□ 0.3
PSMD11-207ENST00000578397 TNPO2O14787 897 aaKnown RBP16.89■□□□□ 0.29
PSMD11-207ENST00000578397 GDF11O95390 407 aa16.89■□□□□ 0.29
PSMD11-207ENST00000578397 HOXA7P31268 230 aaPredicted RBP16.89■□□□□ 0.29
PSMD11-207ENST00000578397 MTMR2Q13614 643 aa16.89■□□□□ 0.29
PSMD11-207ENST00000578397 SLAIN1Q8ND83 568 aa16.89■□□□□ 0.29
PSMD11-207ENST00000578397 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
PSMD11-207ENST00000578397 LRRCC1Q9C099 1032 aa16.89■□□□□ 0.29
PSMD11-207ENST00000578397 PTPRFP10586 1907 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 MYCP01106 439 aaPredicted RBP16.88■□□□□ 0.29
PSMD11-207ENST00000578397 FLT3LGP49771 235 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 UBXN2AP68543 259 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 IRF5Q13568 498 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 COA7Q96BR5 231 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 BCL11AQ9H165 835 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 BOLA2Q9H3K6 86 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 GABRQQ9UN88 632 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 ZSWIM8A7E2V4 1837 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 ZNF532Q9HCE3 1301 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 MYO5AQ9Y4I1 1855 aaKnown RBP16.88■□□□□ 0.29
PSMD11-207ENST00000578397 CENPFP49454 3210 aa16.88■□□□□ 0.29
PSMD11-207ENST00000578397 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 TCRBV5S4A2TA0A5A2 114 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 GH2P01242 217 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 POLR3DP05423 398 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-207ENST00000578397 IRX3P78415 501 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-207ENST00000578397 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 PXYLP1Q8TE99 480 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 HAUS7Q99871 368 aa16.87■□□□□ 0.29
PSMD11-207ENST00000578397 BIN2Q9UBW5 565 aaPredicted RBP16.87■□□□□ 0.29
PSMD11-207ENST00000578397 RBBP6Q7Z6E9 1792 aaKnown RBP16.87■□□□□ 0.29
PSMD11-207ENST00000578397 ADCY3O60266 1144 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 MTFR1Q15390 333 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 SHROOM1Q2M3G4 852 aaPredicted RBP16.86■□□□□ 0.29
PSMD11-207ENST00000578397 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
PSMD11-207ENST00000578397 USP17L2Q6R6M4 530 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 EDC3Q96F86 508 aaKnown RBP16.86■□□□□ 0.29
PSMD11-207ENST00000578397 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.294e-8■■□□□ 14.2
PSMD11-207ENST00000578397 MORF4L1Q9UBU8 362 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
PSMD11-207ENST00000578397 GJB1P08034 283 aa16.85■□□□□ 0.29
PSMD11-207ENST00000578397 ADD2P35612 726 aa16.85■□□□□ 0.29
PSMD11-207ENST00000578397 PLCD1P51178 756 aa16.85■□□□□ 0.29
PSMD11-207ENST00000578397 GTF3C2Q8WUA4 911 aaPredicted RBP16.85■□□□□ 0.29
PSMD11-207ENST00000578397 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
PSMD11-207ENST00000578397 MCM9Q9NXL9 1143 aa16.85■□□□□ 0.29
PSMD11-207ENST00000578397 LOC285556D6RIA3 1793 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 CCL5P13501 91 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 GABPAQ06546 454 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 ABCB5Q2M3G0 1257 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 C12orf42Q96LP6 360 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 P2RX7Q99572 595 aaKnown RBP16.84■□□□□ 0.29
PSMD11-207ENST00000578397 DCP1AQ9NPI6 582 aaPredicted RBP16.84■□□□□ 0.29
PSMD11-207ENST00000578397 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
PSMD11-207ENST00000578397 CAPN2P17655 700 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 SHMT1P34896 483 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 GJA8P48165 433 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 USP14P54578 494 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 HERVK_113P62684 666 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 UBE3CQ15386 1083 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 ZSCAN25Q6NSZ9 544 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 LCORLQ8N3X6 602 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 SDR42E1Q8WUS8 393 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 ATAD5Q96QE3 1844 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 FEZ1Q99689 392 aa16.83■□□□□ 0.28
PSMD11-207ENST00000578397 KIAA1683Q9H0B3 1180 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms