RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SGPL1O95470 568 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 HOXA7P31268 230 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 PRMT2P55345 433 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 HNRNPUQ00839 825 aaKnown RBP eCLIP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 G3BP1Q13283 466 aaKnown RBP eCLIP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 MTMR2Q13614 643 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 CCL14Q16627 93 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 FAM110CQ1W6H9 321 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 SPTY2D1Q68D10 685 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 NAA16Q6N069 864 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 CLEC10AQ8IUN9 316 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 ZSCAN29Q8IWY8 852 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 MIGA1Q8NAN2 632 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 PROCA1Q8NCQ7 364 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 SLC44A5Q8NCS7 719 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 U2AF1L4Q8WU68 220 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 PARK7Q99497 189 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 IL1RAPL2Q9NP60 686 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 FLRT1Q9NZU1 646 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 ZBTB21Q9ULJ3 1066 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 COL6A3P12111 3177 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 FRMPD3Q5JV73 1810 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 PFASO15067 1338 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 ZBED9Q6R2W3 1325 aa5.48□□□□□ -1.53
PPP4R1-209ENST00000578329 LAMA2P24043 3122 aaKnown RBP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 GREB1LQ9C091 1923 aaPredicted RBP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 CYP2D7A0A087X1C5 515 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 USP17L5A8MUK1 530 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 MAP4K4O95819 1239 aaPredicted RBP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 GH2P01242 217 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 UQCRFS1P1P0C7P4 283 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 CYP7A1P22680 504 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 FCGRTP55899 365 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 BACE1P56817 501 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 MORN1Q5T089 497 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 LHX8Q68G74 356 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 FASTKD5Q7L8L6 764 aaKnown RBP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 ITPRIPQ8IWB1 547 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 LCORLQ8N3X6 602 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 TRPV1Q8NER1 839 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 RHPN1Q8TCX5 695 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 PXYLP1Q8TE99 480 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 C12orf42Q96LP6 360 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 RNF208Q9H0X6 261 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 PICK1Q9NRD5 415 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 BTBD7Q9P203 1132 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 LRP2BPQ9P2M1 347 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 PI4KBQ9UBF8 816 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 HERC5Q9UII4 1024 aaKnown RBP5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 NAV1Q8NEY1 1877 aa5.47□□□□□ -1.53
PPP4R1-209ENST00000578329 BAZ2AQ9UIF9 1905 aaKnown RBP5.46□□□□□ -1.53
PPP4R1-209ENST00000578329 TNPO2O14787 897 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 FOXP2O15409 715 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 LDHCP07864 332 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 COL6A1P12109 1028 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 PDE6AP16499 860 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 HERVK_113P62684 666 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 GSTO1P78417 241 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 TTC39AQ5SRH9 613 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 CHRDL2Q6WN34 429 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 FOXP4Q8IVH2 680 aaPredicted RBP5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 MAGEB6Q8N7X4 407 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 SLAIN1Q8ND83 568 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 RAET1EQ8TD07 263 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 DYNLL2Q96FJ2 89 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 PAWRQ96IZ0 340 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 DEFB118Q96PH6 123 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 TMEM106CQ9BVX2 250 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 EHD4Q9H223 541 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 COG6Q9Y2V7 657 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 TACC3Q9Y6A5 838 aa5.46□□□□□ -1.54
PPP4R1-209ENST00000578329 SPDYE16A6NNV3 312 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 RBAK-RBAKDNI3L0D1 243 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 SMARCA5O60264 1052 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 IDH1O75874 414 aaKnown RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 FARP2O94887 1054 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 VCAM1P19320 739 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 CCND3P30281 292 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 CACNB2Q08289 660 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 KIF22Q14807 665 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 SEPT2Q15019 361 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 GORABQ5T7V8 394 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 DIEXFQ68CQ4 756 aaKnown RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 CATSPERGQ6ZRH7 1159 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 NBPF11Q86T75 865 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 AACSQ86V21 672 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 SLF2Q8IX21 1173 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 NPLOC4Q8TAT6 608 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 NKX2-3Q8TAU0 364 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 OTUD7AQ8TE49 926 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 SDR42E1Q8WUS8 393 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 GDF15Q99988 308 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 KIAA1683Q9H0B3 1180 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 DHX36Q9H2U1 1008 aaKnown RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 DCP1AQ9NPI6 582 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 OGDHLQ9ULD0 1010 aa5.45□□□□□ -1.54
PPP4R1-209ENST00000578329 HDAC5Q9UQL6 1122 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms