RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
TRAPPC8-204ENST00000578252 POLR3DP05423 398 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 SLC3A2P08195 630 aaKnown RBP13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 LARP6Q9BRS8 491 aaKnown RBP13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 USP26Q9BXU7 913 aa13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 ROBO3Q96MS0 1386 aa13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 POLR2AP24928 1970 aaKnown RBP13.31□□□□□ -0.28
TRAPPC8-204ENST00000578252 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 USP17L21D6R901 530 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZNF213O14771 459 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 YY1P25490 414 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 NT5C2P49902 561 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 TCP10Q12799 353 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 RASA3Q14644 834 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZSCAN29Q8IWY8 852 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 DEFB129Q9H1M3 183 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 EHD4Q9H223 541 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZNF287Q9HBT7 754 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 SAP30BPQ9UHR5 308 aaKnown RBP13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 ANAPC4Q9UJX5 808 aa13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 ASTN2O75129 1339 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC8-204ENST00000578252 MYH8P13535 1937 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 PCP11498 1178 aaKnown RBP13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 HSPA4P34932 840 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 PPARAQ07869 468 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 KRT26Q7Z3Y9 468 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 TRIM34Q9BYJ4 488 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 RNF41Q9H4P4 317 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 PI4KBQ9UBF8 816 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 PALD1Q9ULE6 856 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 SIPA1L1O43166 1804 aa13.29□□□□□ -0.28
TRAPPC8-204ENST00000578252 MINDY4BA8MYZ0 360 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 TBC1D12O60347 775 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 KRT32Q14532 448 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 SUPT20HL1Q3ZLR7 823 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 FOXP4Q8IVH2 680 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 ZFPM1Q8IX07 1006 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 CSRNP1Q96S65 589 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 SWAP70Q9UH65 585 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 SERPINB13Q9UIV8 391 aa13.28□□□□□ -0.28
TRAPPC8-204ENST00000578252 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 SLC27A2O14975 620 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 CYP21A2P08686 494 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 NF2P35240 595 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 ANAPC15P60006 121 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 PDE4BQ07343 736 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 TSGA10IPQ3SY00 556 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 DCAF15Q66K64 600 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 METTL16Q86W50 562 aaKnown RBP13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 CRACR2BQ8N4Y2 399 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 KCNB2Q92953 911 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC8-204ENST00000578252 CYP2D6P10635 497 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 PLCD1P51178 756 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 C16orf86Q6ZW13 317 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 C22orf23Q9BZE7 217 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 CNNM2Q9H8M5 875 aa13.26□□□□□ -0.29
TRAPPC8-204ENST00000578252 CYP2D7A0A087X1C5 515 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 ADM5C9JUS6 153 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 RBM25P49756 843 aaKnown RBP13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 HAND2P61296 217 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 MAP3K10Q02779 954 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 GABPAQ06546 454 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 TRDNQ13061 729 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 MFSD6Q6ZSS7 791 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 USP48Q86UV5 1035 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 KRT23Q9C075 422 aa13.25□□□□□ -0.29
TRAPPC8-204ENST00000578252 E7EWF7 191 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 ORC4O43929 436 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 FGRP09769 529 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 PSMA5P28066 241 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 MFSD10Q14728 455 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 SLC4A8Q2Y0W8 1093 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 NBPF12Q5TAG4 269 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 RALYLQ86SE5 291 aaKnown RBP13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 SPRYD3Q8NCJ5 442 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 IL27Q8NEV9 243 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 IL17RAQ96F46 866 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 CDCA5Q96FF9 252 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 TBC1D32Q96NH3 1257 aa13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 GLIS2Q9BZE0 524 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC8-204ENST00000578252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms