RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
ERBB2-205ENST00000578199 TPD52L1Q16890 204 aaPredicted RBP20.21■□□□□ 0.83
ERBB2-205ENST00000578199 EARS2Q5JPH6 523 aaKnown RBP20.21■□□□□ 0.83
ERBB2-205ENST00000578199 FAM47AQ5JRC9 791 aa20.21■□□□□ 0.83
ERBB2-205ENST00000578199 V9GY48 417 aaPredicted RBP20.21■□□□□ 0.83
ERBB2-205ENST00000578199 RPS6KA4O75676 772 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 KRBA2Q6ZNG9 492 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 HSD3B7Q9H2F3 369 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 FOXP1Q9H334 677 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-205ENST00000578199 PKN1Q16512 942 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 PTPN21Q16825 1174 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 USP49Q70CQ1 688 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 PDILTQ8N807 584 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 BRIP1Q9BX63 1249 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 PDCL3Q9H2J4 239 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
ERBB2-205ENST00000578199 PCDHA5Q9Y5H7 936 aa20.2■□□□□ 0.82
ERBB2-205ENST00000578199 MYH13Q9UKX3 1938 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 FAM237AA0A1B0GTK4 181 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 TNNT1P13805 278 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 CCZ1BP86790 482 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 CCZ1P86791 482 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 ARHGEF1Q92888 912 aaKnown RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 NPHP1O15259 732 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 NOM1Q5C9Z4 860 aaKnown RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 TMC6Q7Z403 805 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 GRAMD1CQ8IYS0 662 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 NYXQ9GZU5 481 aa20.19■□□□□ 0.82
ERBB2-205ENST00000578199 TRMT1Q9NXH9 659 aaKnown RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 CCNL1Q9UK58 526 aaPredicted RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 BAZ2BQ9UIF8 2168 aaKnown RBP20.19■□□□□ 0.82
ERBB2-205ENST00000578199 POLR2DO15514 142 aaKnown RBP20.18■□□□□ 0.82
ERBB2-205ENST00000578199 BMP6P22004 513 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 AKAP17AQ02040 695 aaKnown RBP20.18■□□□□ 0.82
ERBB2-205ENST00000578199 HSP90AA4PQ58FG1 418 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 RILPL1Q5EBL4 403 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 TPTE2Q6XPS3 522 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 MTA3Q9BTC8 594 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 BCL11BQ9C0K0 894 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-205ENST00000578199 SCN7AQ01118 1682 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 TM4SF1P30408 202 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 FUT2Q10981 343 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 VPS72Q15906 364 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 CATIPQ7Z7H3 387 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 ZNF710Q8N1W2 664 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
ERBB2-205ENST00000578199 MYH6P13533 1939 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 DUOX1Q9NRD9 1551 aa20.18■□□□□ 0.82
ERBB2-205ENST00000578199 PRR29P0C7W0 189 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 PTPREP23469 700 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 GTF2F1P35269 517 aaKnown RBP eCLIP20.17■□□□□ 0.82
ERBB2-205ENST00000578199 PDE4BQ07343 736 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 TROAPQ12815 778 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 IQCA1Q86XH1 822 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 RNF26Q9BY78 433 aaPredicted RBP20.17■□□□□ 0.82
ERBB2-205ENST00000578199 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 WNT7AO00755 349 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 MDM2Q00987 491 aaPredicted RBP20.17■□□□□ 0.82
ERBB2-205ENST00000578199 ZNF592Q92610 1267 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 DPF2Q92785 391 aa20.17■□□□□ 0.82
ERBB2-205ENST00000578199 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
ERBB2-205ENST00000578199 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
ERBB2-205ENST00000578199 TOM1O60784 492 aa20.16■□□□□ 0.82
ERBB2-205ENST00000578199 FANCCQ00597 558 aa20.16■□□□□ 0.82
ERBB2-205ENST00000578199 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
ERBB2-205ENST00000578199 CSRNP2Q9H175 543 aa20.16■□□□□ 0.82
ERBB2-205ENST00000578199 RCAN1P53805 252 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 ARMCX5Q6P1M9 558 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 FGRP09769 529 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 VEGFAP15692 232 aaPredicted RBP20.15■□□□□ 0.82
ERBB2-205ENST00000578199 TPM4P67936 248 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 RC3H1Q5TC82 1133 aaKnown RBP20.15■□□□□ 0.82
ERBB2-205ENST00000578199 PHF20Q9BVI0 1012 aa20.15■□□□□ 0.82
ERBB2-205ENST00000578199 USP17L8P0C7I0 530 aa20.14■□□□□ 0.82
ERBB2-205ENST00000578199 SRBD1Q8N5C6 995 aaKnown RBP20.14■□□□□ 0.82
ERBB2-205ENST00000578199 CRNKL1Q9BZJ0 848 aaKnown RBP20.14■□□□□ 0.82
ERBB2-205ENST00000578199 ANKRD2Q9GZV1 360 aa20.14■□□□□ 0.82
ERBB2-205ENST00000578199 FANCLQ9NW38 375 aa20.14■□□□□ 0.82
ERBB2-205ENST00000578199 IKBKBO14920 756 aa20.14■□□□□ 0.81
ERBB2-205ENST00000578199 SEMA3EO15041 775 aa20.14■□□□□ 0.81
ERBB2-205ENST00000578199 NEMFO60524 1076 aa20.14■□□□□ 0.81
ERBB2-205ENST00000578199 OSBPL5Q9H0X9 879 aaPredicted RBP20.14■□□□□ 0.81
ERBB2-205ENST00000578199 ANKIB1Q9P2G1 1089 aa20.14■□□□□ 0.81
ERBB2-205ENST00000578199 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.14■□□□□ 0.81
ERBB2-205ENST00000578199 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
ERBB2-205ENST00000578199 ADAMTS3O15072 1205 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 PRPF3O43395 683 aaKnown RBP20.13■□□□□ 0.81
ERBB2-205ENST00000578199 MYL5Q02045 173 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 POSTNQ15063 836 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 NFIXQ14938 502 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 GRIK5Q16478 980 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 OLFM4Q6UX06 510 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 MCM9Q9NXL9 1143 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 MAN1B1Q9UKM7 699 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 BTAF1O14981 1849 aa20.13■□□□□ 0.81
ERBB2-205ENST00000578199 SERPINC1P01008 464 aa20.12■□□□□ 0.81
ERBB2-205ENST00000578199 KRT2P35908 639 aa20.12■□□□□ 0.81
ERBB2-205ENST00000578199 A0A087X0B3 334 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms