RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 KIF3AQ9Y496 699 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 BRD1O95696 1058 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 PKP1Q13835 747 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 SPDYE2Q495Y8 402 aa21.72■■□□□ 1.07
PRKCA-203ENST00000578063 TNPO1Q92973 898 aaKnown RBP21.72■■□□□ 1.07
PRKCA-203ENST00000578063 ZBED3Q96IU2 234 aaPredicted RBP21.72■■□□□ 1.07
PRKCA-203ENST00000578063 WDR33Q9C0J8 1336 aaKnown RBP21.71■■□□□ 1.07
PRKCA-203ENST00000578063 ATRNL1Q5VV63 1379 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 PTPDC1A2A3K4 754 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 GOLGA8AA7E2F4 631 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 CPLX1O14810 134 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 MYO1BO43795 1136 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 TCP10Q12799 353 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 FKBP1CQ5VVH2 108 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 ZNF654Q8IZM8 581 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 MYOZ2Q9NPC6 264 aa21.71■■□□□ 1.07
PRKCA-203ENST00000578063 ZNF70Q9UC06 446 aaPredicted RBP21.71■■□□□ 1.07
PRKCA-203ENST00000578063 JAK2O60674 1132 aa21.7■■□□□ 1.06
PRKCA-203ENST00000578063 CDKL5O76039 1030 aa21.7■■□□□ 1.06
PRKCA-203ENST00000578063 CTDNEP1O95476 244 aa21.7■■□□□ 1.06
PRKCA-203ENST00000578063 SYT1P21579 422 aa21.7■■□□□ 1.06
PRKCA-203ENST00000578063 CPLX2Q6PUV4 134 aaKnown RBP21.7■■□□□ 1.06
PRKCA-203ENST00000578063 DGKHQ86XP1 1220 aa21.7■■□□□ 1.06
PRKCA-203ENST00000578063 STX6O43752 255 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 GMPSP49915 693 aaPredicted RBP21.69■■□□□ 1.06
PRKCA-203ENST00000578063 CATIPQ7Z7H3 387 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 RAB11FIP4Q86YS3 637 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 ZFPM1Q8IX07 1006 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 NEDD1Q8NHV4 660 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 PI4KBQ9UBF8 816 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 ZDHHC9Q9Y397 364 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 GJA3Q9Y6H8 435 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 ZNF541Q9H0D2 1346 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 DDAH1O94760 285 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 PPP2R5BQ15173 497 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 ZSCAN29Q8IWY8 852 aaPredicted RBP21.69■■□□□ 1.06
PRKCA-203ENST00000578063 FAM184AQ8NB25 1140 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 ANKS1AQ92625 1134 aa21.69■■□□□ 1.06
PRKCA-203ENST00000578063 CCDC196A0A1B0GTZ2 297 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 CLRN2A0PK11 232 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 DDTLA6NHG4 134 aaPredicted RBP21.68■■□□□ 1.06
PRKCA-203ENST00000578063 NMT2O60551 498 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 CALM1P0DP23 149 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 CALM2P0DP24 149 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 CALM3P0DP25 149 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 YBX3P16989 372 aaKnown RBP eCLIP21.68■■□□□ 1.062e-7■■□□□ 13
PRKCA-203ENST00000578063 LARP1BQ659C4 914 aaKnown RBP21.68■■□□□ 1.06
PRKCA-203ENST00000578063 GBP4Q96PP9 640 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 MYL10Q9BUA6 226 aa21.68■■□□□ 1.06
PRKCA-203ENST00000578063 DICER1Q9UPY3 1922 aaKnown RBP21.67■■□□□ 1.06
PRKCA-203ENST00000578063 WNT10BO00744 389 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 RXRAP19793 462 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 NFKBIBQ15653 356 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 RTN1Q16799 776 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 FOXP4Q8IVH2 680 aaPredicted RBP21.67■■□□□ 1.06
PRKCA-203ENST00000578063 MICALL2Q8IY33 904 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 CRACR2BQ8N4Y2 399 aaPredicted RBP21.67■■□□□ 1.06
PRKCA-203ENST00000578063 IL17RBQ9NRM6 502 aa21.67■■□□□ 1.06
PRKCA-203ENST00000578063 RCSD1Q6JBY9 416 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 CLEC17AQ6ZS10 378 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 SH3BP5LQ7L8J4 393 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 FAM151AQ8WW52 585 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 DDX11Q96FC9 970 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 TRIM34Q9BYJ4 488 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 TCP10L2B9ZVM9 353 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 CDC27P30260 824 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 SHMT1P34896 483 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 FAM83AQ86UY5 434 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 METTL16Q86W50 562 aaKnown RBP21.66■■□□□ 1.06
PRKCA-203ENST00000578063 GPC2Q8N158 579 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 NUP133Q8WUM0 1156 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 KAT14Q9H8E8 782 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 VEZTQ9HBM0 779 aa21.66■■□□□ 1.06
PRKCA-203ENST00000578063 DTNBO60941 627 aa21.65■■□□□ 1.06
PRKCA-203ENST00000578063 ZSCAN22P10073 491 aaPredicted RBP21.65■■□□□ 1.06
PRKCA-203ENST00000578063 ADD1P35611 737 aaKnown RBP21.65■■□□□ 1.06
PRKCA-203ENST00000578063 CCDC144CPQ8IYA2 1237 aa21.65■■□□□ 1.06
PRKCA-203ENST00000578063 FANCBQ8NB91 859 aa21.65■■□□□ 1.06
PRKCA-203ENST00000578063 CCDC17Q96LX7 622 aa21.65■■□□□ 1.06
PRKCA-203ENST00000578063 FAM217BQ9NTX9 383 aaPredicted RBP21.65■■□□□ 1.06
PRKCA-203ENST00000578063 CNOT7Q9UIV1 285 aaKnown RBP21.65■■□□□ 1.06
PRKCA-203ENST00000578063 SHTN1A0MZ66 631 aa21.64■■□□□ 1.06
PRKCA-203ENST00000578063 TROAPQ12815 778 aa21.64■■□□□ 1.06
PRKCA-203ENST00000578063 RBM28Q9NW13 759 aaKnown RBP21.64■■□□□ 1.06
PRKCA-203ENST00000578063 MTMR6Q9Y217 621 aa21.64■■□□□ 1.06
PRKCA-203ENST00000578063 SIPA1L1O43166 1804 aa21.64■■□□□ 1.05
PRKCA-203ENST00000578063 CNTNAP1P78357 1384 aa21.64■■□□□ 1.05
PRKCA-203ENST00000578063 NTRK3Q16288 839 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 NBPF9Q3BBW0 867 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 CSRNP1Q96S65 589 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 DNAJC18Q9H819 358 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 STK36Q9NRP7 1315 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 SBF1O95248 1867 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 VPS37CA5D8V6 355 aaPredicted RBP21.63■■□□□ 1.05
PRKCA-203ENST00000578063 SOCS7O14512 581 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 IFNAR1P17181 557 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 NOVP48745 357 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 TNNI2P48788 182 aa21.63■■□□□ 1.05
PRKCA-203ENST00000578063 PPP4R3BQ5MIZ7 849 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms