RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 ZBTB40Q9NUA8 1239 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 TMOD4Q9NZQ9 345 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 RCAN3Q9UKA8 241 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
RN7SL560P-201ENST00000577943 MYH8P13535 1937 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 ADCY3O60266 1144 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 IFIT2P09913 472 aaKnown RBP18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 GCLCP48506 637 aaPredicted RBP18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 BACE1P56817 501 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 JAG1P78504 1218 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 NKX2-3Q8TAU0 364 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 COA7Q96BR5 231 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 ASCC2Q9H1I8 757 aaPredicted RBP18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 GINM1Q9NU53 330 aa18.16■□□□□ 0.5
RN7SL560P-201ENST00000577943 MYH7P12883 1935 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 C19orf81C9J6K1 198 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 CCL5P13501 91 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 IRX3P78415 501 aaPredicted RBP18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 SHROOM1Q2M3G4 852 aaPredicted RBP18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 TAOK2Q9UL54 1235 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 ZBTB21Q9ULJ3 1066 aa18.15■□□□□ 0.5
RN7SL560P-201ENST00000577943 USP17L10C9JJH3 530 aa18.14■□□□□ 0.49
RN7SL560P-201ENST00000577943 RAB11FIP3O75154 756 aa18.14■□□□□ 0.49
RN7SL560P-201ENST00000577943 DNAJC2Q99543 621 aaKnown RBP18.14■□□□□ 0.49
RN7SL560P-201ENST00000577943 SERPINB13Q9UIV8 391 aa18.14■□□□□ 0.49
RN7SL560P-201ENST00000577943 MAGEB6P1A0A0J9YX57 407 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 GJB1P08034 283 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 ELNP15502 786 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 GJA8P48165 433 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 IRF5Q13568 498 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 TTC6Q86TZ1 520 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 PXYLP1Q8TE99 480 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 SHISA4Q96DD7 197 aa18.13■□□□□ 0.49
RN7SL560P-201ENST00000577943 DDX60LQ5H9U9 1706 aaKnown RBP18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 BAZ2AQ9UIF9 1905 aaKnown RBP18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 GOLIM4O00461 696 aa18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 GH2P01242 217 aa18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 HOXA7P31268 230 aaPredicted RBP18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 RIOK1Q9BRS2 568 aaKnown RBP18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 UNC93B1Q9H1C4 597 aa18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 EHD4Q9H223 541 aa18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 PLXNB2O15031 1838 aa18.12■□□□□ 0.49
RN7SL560P-201ENST00000577943 INHAP05111 366 aa18.11■□□□□ 0.49
RN7SL560P-201ENST00000577943 POLR3DP05423 398 aaPredicted RBP18.11■□□□□ 0.49
RN7SL560P-201ENST00000577943 PDE6AP16499 860 aa18.11■□□□□ 0.49
RN7SL560P-201ENST00000577943 TATDN1Q6P1N9 297 aa18.11■□□□□ 0.49
RN7SL560P-201ENST00000577943 CRNKL1Q9BZJ0 848 aaKnown RBP18.11■□□□□ 0.49
RN7SL560P-201ENST00000577943 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 CERKLQ49MI3 558 aaPredicted RBP18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 USP17L2Q6R6M4 530 aa18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 U2AF1L4Q8WU68 220 aaKnown RBP18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 P2RX7Q99572 595 aaKnown RBP18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 FEZ1Q99689 392 aa18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 MORF4L1Q9UBU8 362 aa18.1■□□□□ 0.49
RN7SL560P-201ENST00000577943 CEP290O15078 2479 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 PLCD1P51178 756 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 HERVK_113P62684 666 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 RAB3GAP1Q15042 981 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 ZYXQ15942 572 aaKnown RBP18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 EDC3Q96F86 508 aaKnown RBP18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 BOLA2Q9H3K6 86 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 CABP5Q9NP86 173 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 EMILIN3Q9NT22 766 aa18.09■□□□□ 0.49
RN7SL560P-201ENST00000577943 SGPL1O95470 568 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 PDE3AQ14432 1141 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 DPF3Q92784 378 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 PAG1Q9NWQ8 432 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 MCM9Q9NXL9 1143 aa18.08■□□□□ 0.48
RN7SL560P-201ENST00000577943 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
RN7SL560P-201ENST00000577943 GTF3C2Q8WUA4 911 aaPredicted RBP18.07■□□□□ 0.48
RN7SL560P-201ENST00000577943 SDR42E1Q8WUS8 393 aa18.07■□□□□ 0.48
RN7SL560P-201ENST00000577943 TXNRD2Q9NNW7 524 aa18.07■□□□□ 0.48
RN7SL560P-201ENST00000577943 GJD2Q9UKL4 321 aa18.07■□□□□ 0.48
RN7SL560P-201ENST00000577943 PEX10O60683 326 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 TFRCP02786 760 aaKnown RBP18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 HMGCRP04035 888 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 ATP5JP18859 108 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 SHMT1P34896 483 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 USP14P54578 494 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 HABP4Q5JVS0 413 aaKnown RBP18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 LCORLQ8N3X6 602 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 DEFB118Q96PH6 123 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 PAGR1Q9BTK6 254 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 HTATIP2Q9BUP3 242 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 LRRCC1Q9C099 1032 aa18.06■□□□□ 0.48
RN7SL560P-201ENST00000577943 FARP2O94887 1054 aaPredicted RBP18.05■□□□□ 0.48
RN7SL560P-201ENST00000577943 ADD2P35612 726 aa18.05■□□□□ 0.48
RN7SL560P-201ENST00000577943 ERVK-9P63128 1117 aa18.05■□□□□ 0.48
RN7SL560P-201ENST00000577943 ERVK-24P63145 666 aa18.05■□□□□ 0.48
RN7SL560P-201ENST00000577943 C12orf42Q96LP6 360 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms