RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 ORC4O43929 436 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 PPP6R2O75170 966 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 ST5P78524 1137 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 SAFBQ15424 915 aaKnown RBP eCLIP27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 WDR66Q8TBY9 1149 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 KIAA1468Q9P260 1216 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 ARPP21Q9UBL0 812 aaPredicted RBP27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 NAV1Q8NEY1 1877 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 ZNF75DP51815 510 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 ZNF804AQ7Z570 1209 aa27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 DHX40Q8IX18 779 aaKnown RBP27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 RNF26Q9BY78 433 aaPredicted RBP27.31■■□□□ 1.96
NPLOC4-217ENST00000574897 FAM205CA6NFA0 338 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 BIN1O00499 593 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 SPECC1Q5M775 1068 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 KRT27Q7Z3Y8 459 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 PLA2G4DQ86XP0 818 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 DYNLL2Q96FJ2 89 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 ANO10Q9NW15 660 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 PCP11498 1178 aaKnown RBP27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 DPCR1Q3MIW9 517 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 SBK1Q52WX2 424 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 PROM2Q8N271 834 aa27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 V9GY48 417 aaPredicted RBP27.3■■□□□ 1.96
NPLOC4-217ENST00000574897 ATP2B1P20020 1258 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 GRIN1Q05586 938 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 KIAA2012Q0VF49 1180 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 MKRN1Q9UHC7 482 aaKnown RBP27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 NRBP1Q9UHY1 535 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 HPSEQ9Y251 543 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 CAVIN2O95810 425 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 SYKP43405 635 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 USP5P45974 858 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 PCDHB6Q9Y5E3 794 aa27.29■■□□□ 1.96
NPLOC4-217ENST00000574897 GOLGA6L19H0YKK7 550 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 SLC3A2P08195 630 aaKnown RBP27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 FOXP1Q9H334 677 aaPredicted RBP27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 ANO8Q9HCE9 1232 aaPredicted RBP27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 CD209Q9NNX6 404 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 TSPY2A6NKD2 308 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 PTGS1P23219 599 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 SLC27A3Q5K4L6 730 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 ISM2Q6H9L7 571 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 AOPEPQ8N6M6 819 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 JMYQ8N9B5 988 aa27.28■■□□□ 1.96
NPLOC4-217ENST00000574897 POLRMTO00411 1230 aaKnown RBP27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 AKAP17AQ02040 695 aaKnown RBP27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 RESP18Q5W5W9 173 aa27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 ANKRD31Q8N7Z5 1873 aa27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 EARS2Q5JPH6 523 aaKnown RBP27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 TGFBRAP1Q8WUH2 860 aa27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 RBM17Q96I25 401 aaKnown RBP27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 CABP5Q9NP86 173 aa27.27■■□□□ 1.96
NPLOC4-217ENST00000574897 C12orf60Q5U649 245 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 RCSD1Q6JBY9 416 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 TMTC3Q6ZXV5 915 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 SRBD1Q8N5C6 995 aaKnown RBP27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 POLLQ9UGP5 575 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 PYCARDQ9ULZ3 195 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 PDE4BQ07343 736 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 PPP2R5BQ15173 497 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 DRC7Q8IY82 874 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 CEP57L1Q8IYX8 460 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 PIBF1Q8WXW3 757 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 GGA1Q9UJY5 639 aa27.26■■□□□ 1.95
NPLOC4-217ENST00000574897 BECN2A8MW95 431 aa27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 PRPF3O43395 683 aaKnown RBP27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 CUTAO60888 179 aa27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 TXNRD1Q16881 649 aa27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 NOM1Q5C9Z4 860 aaKnown RBP27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 C15orf52Q6ZUT6 534 aaKnown RBP27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 SLC44A5Q8NCS7 719 aa27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 CNTNAP5Q8WYK1 1306 aa27.25■■□□□ 1.95
NPLOC4-217ENST00000574897 ZBTB22O15209 634 aa27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 DDAH1O94760 285 aa27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 RBM28Q9NW13 759 aaKnown RBP27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 SAP30BPQ9UHR5 308 aaKnown RBP27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 VEGFAP15692 232 aaPredicted RBP27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 CCDC186Q7Z3E2 898 aa27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 MAPKAPK5Q8IW41 473 aa27.24■■□□□ 1.95
NPLOC4-217ENST00000574897 TFAP4Q01664 338 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 RILPL1Q5EBL4 403 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 KRI1Q8N9T8 703 aaKnown RBP27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 PHF20Q9BVI0 1012 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 RTFDC1Q9BY42 306 aaPredicted RBP27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 IL17RBQ9NRM6 502 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 R3HCC1Q9Y3T6 440 aaKnown RBP27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 CALM1P0DP23 149 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 CALM2P0DP24 149 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 CALM3P0DP25 149 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 ATP2B4P23634 1241 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 LONRF3Q496Y0 759 aa27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 FBXO2Q9UK22 296 aaPredicted RBP27.23■■□□□ 1.95
NPLOC4-217ENST00000574897 PLCD1P51178 756 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 PNOCQ13519 176 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 TBC1D16Q8TBP0 767 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 LTBP1Q14766 1721 aa27.22■■□□□ 1.95
NPLOC4-217ENST00000574897 FAM237AA0A1B0GTK4 181 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms