RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 ZNF772Q68DY9 489 aaPredicted RBP12.1□□□□□ -0.47
USP43-205ENST00000574408 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 PPEF1O14829 653 aaPredicted RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 MMP1P03956 469 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 NDUFA8P51970 172 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 SLC39A14Q15043 492 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 NLGN1Q8N2Q7 840 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 TGFBRAP1Q8WUH2 860 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 DNAJC25Q9H1X3 360 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 hCG_1642624A0A1W2PR95 340 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 KLRG2A4D1S0 409 aaPredicted RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 PLEKHA8P1O95397 391 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 IL1R1P14778 569 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 TROAPQ12815 778 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 PPP2R5BQ15173 497 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 MFSD14BQ5SR56 506 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 FMR1NBQ8N0W7 255 aaPredicted RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 DYNLL2Q96FJ2 89 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 CBX8Q9HC52 389 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 C12orf60Q5U649 245 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 MAPKAPK5Q8IW41 473 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
USP43-205ENST00000574408 RNF26Q9BY78 433 aaPredicted RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 MKRN1Q9UHC7 482 aaKnown RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 ZHX1Q9UKY1 873 aaPredicted RBP12.09□□□□□ -0.47
USP43-205ENST00000574408 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 PLSCR1O15162 318 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 IGSF3O75054 1194 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 BTDP43251 543 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 PPP4CP60510 307 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 AXDND1Q5T1B0 1012 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 AMOTL1Q8IY63 956 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 WDHD1O75717 1129 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 DDAH1O94760 285 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 CALM1P0DP23 149 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 CALM2P0DP24 149 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 CALM3P0DP25 149 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 ZNF165P49910 485 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 JMYQ8N9B5 988 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 ERCC4Q92889 916 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 RTFDC1Q9BY42 306 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 RBM28Q9NW13 759 aaKnown RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 SAP30BPQ9UHR5 308 aaKnown RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
USP43-205ENST00000574408 CTCFLQ8NI51 663 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 NOL7Q9UMY1 257 aaKnown RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 V9GY48 417 aaPredicted RBP12.08□□□□□ -0.48
USP43-205ENST00000574408 AP5Z1O43299 807 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 MMP10P09238 476 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 TFAP4Q01664 338 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 NR5A1Q13285 461 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 PTPAQ15257 358 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 OLFM4Q6UX06 510 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 MAP3K14Q99558 947 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 MKNK2Q9HBH9 465 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 BAZ2BQ9UIF8 2168 aaKnown RBP12.07□□□□□ -0.48
USP43-205ENST00000574408 A0A087WWV3 80 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 CMA1P23946 247 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 FUT2Q10981 343 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 MSL1Q68DK7 614 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 TSC1Q92574 1164 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 ATP6V0A2Q9Y487 856 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 LAMB1P07942 1786 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 PFKFB1P16118 471 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 XBP1P17861 261 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 GTF2IP78347 998 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 STX1AQ16623 288 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 TMTC3Q6ZXV5 915 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 TEX11Q8IYF3 940 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 SLC44A5Q8NCS7 719 aa12.07□□□□□ -0.48
USP43-205ENST00000574408 FOXP1Q9H334 677 aaPredicted RBP12.07□□□□□ -0.48
USP43-205ENST00000574408 PPP6R2O75170 966 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 SRGNP10124 158 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 ATP2B1P20020 1258 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 PKN1Q16512 942 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 ZKSCAN5Q9Y2L8 839 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 PRPF3O43395 683 aaKnown RBP12.06□□□□□ -0.48
USP43-205ENST00000574408 ZNF202O95125 648 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 NPR1P16066 1061 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 CLIC6Q96NY7 704 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 PARP3Q9Y6F1 533 aa12.06□□□□□ -0.48
USP43-205ENST00000574408 GPR75-ASB3A0A0A6YYF3 556 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 TOB1P50616 345 aaPredicted RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 PLCD1P51178 756 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 C11orf57Q6ZUT1 292 aaPredicted RBP12.05□□□□□ -0.48
USP43-205ENST00000574408 PIBF1Q8WXW3 757 aa12.05□□□□□ -0.48
USP43-205ENST00000574408 SHISA4Q96DD7 197 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms