RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 CAPNS2Q96L46 248 aa18.67■□□□□ 0.58
CCNE1-204ENST00000574121 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
CCNE1-204ENST00000574121 ELP3Q9H9T3 547 aa18.67■□□□□ 0.58
CCNE1-204ENST00000574121 MKNK2Q9HBH9 465 aa18.67■□□□□ 0.58
CCNE1-204ENST00000574121 LAMB1P07942 1786 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 PTPRAP18433 802 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 NOGQ13253 232 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 RRP1BQ14684 758 aaKnown RBP18.66■□□□□ 0.58
CCNE1-204ENST00000574121 ABCB5Q2M3G0 1257 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 SPRYD7Q5W111 196 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 PAXIP1Q6ZW49 1069 aaPredicted RBP18.66■□□□□ 0.58
CCNE1-204ENST00000574121 OPTNQ96CV9 577 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 CABP5Q9NP86 173 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 ZBTB21Q9ULJ3 1066 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCNE1-204ENST00000574121 OTOFQ9HC10 1997 aa18.66■□□□□ 0.58
CCNE1-204ENST00000574121 FAM155AB1AL88 458 aaPredicted RBP18.65■□□□□ 0.58
CCNE1-204ENST00000574121 ORC4O43929 436 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 RASA1P20936 1047 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 CYP4F22Q6NT55 531 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 TMEM179Q6ZVK1 233 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 STAG1Q8WVM7 1258 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 WNK4Q96J92 1243 aa18.65■□□□□ 0.58
CCNE1-204ENST00000574121 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 GDF11O95390 407 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 GH2P01242 217 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 PPIL2Q13356 520 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
CCNE1-204ENST00000574121 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
CCNE1-204ENST00000574121 RBM8AQ9Y5S9 174 aaKnown RBP18.64■□□□□ 0.57
CCNE1-204ENST00000574121 MAP2K2P36507 400 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 VEGFBP49765 207 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 HAND2P61296 217 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 MFSD6Q6ZSS7 791 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 REM2Q8IYK8 340 aaPredicted RBP18.63■□□□□ 0.57
CCNE1-204ENST00000574121 OTUD5Q96G74 571 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 NBPF3Q9H094 633 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 WDR33Q9C0J8 1336 aaKnown RBP18.63■□□□□ 0.57
CCNE1-204ENST00000574121 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
CCNE1-204ENST00000574121 CXCL11O14625 94 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 JAG1P78504 1218 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 RNF20Q5VTR2 975 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 TBC1D10CQ8IV04 446 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 WDR18Q9BV38 432 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 CNNM2Q9H8M5 875 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 KCNH4Q9UQ05 1017 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 ZHX2Q9Y6X8 837 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 PLIN4Q96Q06 1357 aa18.62■□□□□ 0.57
CCNE1-204ENST00000574121 MANSC4A6NHS7 340 aaPredicted RBP18.61■□□□□ 0.57
CCNE1-204ENST00000574121 MPHOSPH10O00566 681 aaKnown RBP18.61■□□□□ 0.57
CCNE1-204ENST00000574121 IRF6O14896 467 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 PRDM1O75626 825 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 CYP21A2P08686 494 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 AKR1B1P15121 316 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 GJA5P36382 358 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 INHBEP58166 350 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 SNAPC2Q13487 334 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 NECTIN1Q15223 517 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 PPP4R3BQ5MIZ7 849 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 STK11IPQ8N1F8 1099 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 ZNF280CQ8ND82 737 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 KANSL2Q9H9L4 492 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 AFG3L2Q9Y4W6 797 aa18.61■□□□□ 0.57
CCNE1-204ENST00000574121 TSPY3P0CV98 308 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 TSPY8P0CW00 308 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 GTF2A2P52657 109 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 RAB3GAP1Q15042 981 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 NEDD1Q8NHV4 660 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 ESR2Q92731 530 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 KRT23Q9C075 422 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 LAMA4Q16363 1823 aa18.6■□□□□ 0.57
CCNE1-204ENST00000574121 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 SREBF2Q12772 1141 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 TRDNQ13061 729 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 GRM1Q13255 1194 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 SEPT2Q15019 361 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 SHROOM1Q2M3G4 852 aaPredicted RBP18.59■□□□□ 0.57
CCNE1-204ENST00000574121 MS4A4AQ96JQ5 239 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 TOMM22Q9NS69 142 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.59■□□□□ 0.57
CCNE1-204ENST00000574121 TACC3Q9Y6A5 838 aa18.59■□□□□ 0.57
CCNE1-204ENST00000574121 IGKV6D-41A0A0C4DH26 115 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 TESPA1A2RU30 521 aaPredicted RBP18.58■□□□□ 0.56
CCNE1-204ENST00000574121 C19orf81C9J6K1 198 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 SLC27A2O14975 620 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 RANBP6O60518 1105 aaKnown RBP18.58■□□□□ 0.56
CCNE1-204ENST00000574121 CETPP11597 493 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 TFAP4Q01664 338 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 ICA1Q05084 483 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 SPP2Q13103 211 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCNE1-204ENST00000574121 SYNPO2Q9UMS6 1093 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 THSD7BQ9C0I4 1608 aa18.58■□□□□ 0.56
CCNE1-204ENST00000574121 NEDD4P46934 1319 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms