RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 USP17L12C9JPN9 530 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 USP17L21D6R901 530 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 FGFR2P21802 821 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 MCM5P33992 734 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 NLRP5P59047 1200 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 SPTY2D1Q68D10 685 aaPredicted RBP8.65□□□□□ -1.02
RPA1-207ENST00000574049 RUFY3Q7L099 469 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 STAMQ92783 540 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 CNKSR1Q969H4 720 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 EEF2KMTQ96G04 330 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 FTOQ9C0B1 505 aaKnown RBP eCLIP8.65□□□□□ -1.02
RPA1-207ENST00000574049 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 RFX1P22670 979 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 ME3Q16798 604 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 IFNL3Q8IZI9 196 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 TIGD1Q96MW7 591 aa8.65□□□□□ -1.02
RPA1-207ENST00000574049 GTPBP4Q9BZE4 634 aaKnown RBP8.65□□□□□ -1.02
RPA1-207ENST00000574049 CRNKL1Q9BZJ0 848 aaKnown RBP8.65□□□□□ -1.02
RPA1-207ENST00000574049 E7EWF7 191 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 ZMYND10O75800 440 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 BAG3O95817 575 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 IDEP14735 1019 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 LIG1P18858 919 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 SOGA3Q5TF21 947 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 IQCA1Q86XH1 822 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 TTLL6Q8N841 843 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 CTCFLQ8NI51 663 aaPredicted RBP8.65□□□□□ -1.03
RPA1-207ENST00000574049 WDR66Q8TBY9 1149 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 CCDC47Q96A33 483 aaKnown RBP8.65□□□□□ -1.03
RPA1-207ENST00000574049 CENPHQ9H3R5 247 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 ZNF609O15014 1411 aa8.65□□□□□ -1.03
RPA1-207ENST00000574049 ZBTB43O43298 467 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 EIF6P56537 245 aaKnown RBP8.64□□□□□ -1.03
RPA1-207ENST00000574049 TEX11Q8IYF3 940 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 ZNF444Q8N0Y2 327 aaPredicted RBP8.64□□□□□ -1.03
RPA1-207ENST00000574049 AOPEPQ8N6M6 819 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 EYA3Q99504 573 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 SMIM22K7EJ46 135 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 PHACTR2O75167 634 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 LDHCP07864 332 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 GRIK5Q16478 980 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 FAM47AQ5JRC9 791 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 VEZTQ9HBM0 779 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 MAPK8IP1Q9UQF2 711 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 CDKL5O76039 1030 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 EPS15P42566 896 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 CHMP4BP1P59074 171 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 ANAPC15P60006 121 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 SSRP1Q08945 709 aaKnown RBP8.64□□□□□ -1.03
RPA1-207ENST00000574049 RABEP2Q9H5N1 569 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 NRBP1Q9UHY1 535 aa8.64□□□□□ -1.03
RPA1-207ENST00000574049 VIRMAQ69YN4 1812 aaKnown RBP8.64□□□□□ -1.03
RPA1-207ENST00000574049 LARGE1O95461 756 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 CYP2D6P10635 497 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 SKILP12757 684 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 SFPQP23246 707 aaKnown RBP eCLIP8.63□□□□□ -1.03
RPA1-207ENST00000574049 ARID4AP29374 1257 aaPredicted RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 TXLNAP40222 546 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 UBE3CQ15386 1083 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 PPFIBP1Q86W92 1011 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 CAGE1Q8TC20 777 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 JDP2Q8WYK2 163 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 NWD2Q9ULI1 1742 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 KIF20AO95235 890 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 WTAPQ15007 396 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 CCDC96Q2M329 555 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 ZFYVE27Q5T4F4 411 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 ADGRA1Q86SQ6 560 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 IPO4Q8TEX9 1081 aaKnown RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 PRIMPOLQ96LW4 560 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 CEP89Q96ST8 783 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 UBA5Q9GZZ9 404 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 GJB4Q9NTQ9 266 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 ATP6V0A2Q9Y487 856 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 RIC1Q4ADV7 1423 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 AFDNP55196 1824 aaKnown RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 USP17L8P0C7I0 530 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 RPS6KB1P23443 525 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 BTDP43251 543 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 TYRO3Q06418 890 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 PDE4DQ08499 809 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 ARHGAP27Q6ZUM4 889 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 DHX32Q7L7V1 743 aaKnown RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 FBXO33Q7Z6M2 555 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 SP8Q8IXZ3 490 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 CRACR2BQ8N4Y2 399 aaPredicted RBP8.63□□□□□ -1.03
RPA1-207ENST00000574049 UBXN4Q92575 508 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 CRAMP1Q96RY5 1269 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 NRAPQ86VF7 1730 aa8.63□□□□□ -1.03
RPA1-207ENST00000574049 NAA30Q147X3 362 aaPredicted RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 FILIP1LQ4L180 1135 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 AXDND1Q5T1B0 1012 aaPredicted RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 TPCN1Q9ULQ1 816 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 ZBTB12Q9Y330 459 aaPredicted RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 COBLO75128 1261 aa8.62□□□□□ -1.03
RPA1-207ENST00000574049 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
RPA1-207ENST00000574049 STOX1Q6ZVD7 989 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms