RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 CDC42BPAQ5VT25 1732 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 ZMYM6O95789 1325 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 TRAF5O00463 557 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 POLR2DO15514 142 aaKnown RBP13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 CIAO1O76071 339 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 INTS8Q75QN2 995 aaKnown RBP13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 ARMC9Q7Z3E5 817 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 CACNA2D3Q8IZS8 1091 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 GABPB2Q8TAK5 448 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 GOLGA5Q8TBA6 731 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 XAGE2Q96GT9 111 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 RFX7Q2KHR2 1363 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 PNMA6EA0A0J9YXQ4 647 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 E7EWF7 191 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 STX17P56962 302 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 ME3Q16798 604 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 FYB2Q5VWT5 728 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 OTUD7AQ8TE49 926 aaPredicted RBP13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 GSDMAQ96QA5 445 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 CTNND2Q9UQB3 1225 aa13.81□□□□□ -0.2
PCDHGA9-201ENST00000573521 SHROOM2Q13796 1616 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 BICD1Q96G01 975 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 CDK12Q9NYV4 1490 aaPredicted RBP13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 ZNF853P0CG23 659 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 AKNAD1Q5T1N1 836 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 HYOU1Q9Y4L1 999 aa13.8□□□□□ -0.2
PCDHGA9-201ENST00000573521 GADD45BO75293 160 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 PPP1R7Q15435 360 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 LIN9Q5TKA1 542 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 NOSTRINQ8IVI9 506 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 SAMM50Q9Y512 469 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 TNFAIP3P21580 790 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 BCAP29Q9UHQ4 241 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 ADCY10Q96PN6 1610 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 RPAP1Q9BWH6 1393 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 GTPBP6O43824 516 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 PHACTR2O75167 634 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 U2AF2P26368 475 aaKnown RBP eCLIP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 SELENOSQ9BQE4 189 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 NUTM2BA6NNL0 878 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 NUTM2EB1AL46 878 aaPredicted RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 OAS2P29728 719 aaKnown RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 SLC39A6Q13433 755 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 UBE3CQ15386 1083 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 RAB11FIP4Q86YS3 637 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 SUCLG2Q96I99 432 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 SCLT1Q96NL6 688 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 RCOR1Q9UKL0 485 aa13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 BZW2Q9Y6E2 419 aaKnown RBP13.79□□□□□ -0.2
PCDHGA9-201ENST00000573521 DDAH1O94760 285 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 RPS6KA1Q15418 735 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 LGSNQ5TDP6 509 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 PPP1R2P3Q6NXS1 205 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 GPATCH11Q8N954 259 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 IFT81Q8WYA0 676 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 CAPZA3Q96KX2 299 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 FAM227BQ96M60 508 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 ZEB2O60315 1214 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 BCRP11274 1271 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 TSNAXIP1Q2TAA8 658 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 DRC1Q96MC2 740 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 SYNCQ9H7C4 482 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 B4E1Z4 1266 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 N4BP1O75113 896 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 LONP1P36776 959 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 TNNI2P48788 182 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 SMTNP53814 917 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 KRT24Q2M2I5 525 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 SLFNL1Q499Z3 407 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 DAAM2Q86T65 1068 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 TRERF1Q96PN7 1200 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 METTL14Q9HCE5 456 aaKnown RBP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 ADGRL3Q9HAR2 1447 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 GSTA5Q7RTV2 222 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 MTA3Q9BTC8 594 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 MRVI1Q9Y6F6 885 aa13.78□□□□□ -0.2
PCDHGA9-201ENST00000573521 NEURL1BA8MQ27 555 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 hCG_1984214I3L0E3 225 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 CIB2O75838 187 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 PFKFB1P16118 471 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 BEND3Q5T5X7 828 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 SFMBT2Q5VUG0 894 aa13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 ZNF713Q8N859 430 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 FOXP1Q9H334 677 aaPredicted RBP13.77□□□□□ -0.2
PCDHGA9-201ENST00000573521 CCDC151A5D8V7 595 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 IRX4P78413 519 aa13.77□□□□□ -0.21
PCDHGA9-201ENST00000573521 RAPGEF1Q13905 1077 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms