RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 ASNSP08243 561 aa21■□□□□ 0.95
SMG6-212ENST00000573153 GUCY1A2P33402 732 aa21■□□□□ 0.95
SMG6-212ENST00000573153 PSMC4P43686 418 aa21■□□□□ 0.95
SMG6-212ENST00000573153 SRRDQ9UH36 339 aa21■□□□□ 0.95
SMG6-212ENST00000573153 ECM2O94769 699 aaPredicted RBP20.99■□□□□ 0.95
SMG6-212ENST00000573153 GNRH1P01148 92 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 HLA-DOAP06340 250 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 USP5P45974 858 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 BACE1P56817 501 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 MTMR2Q13614 643 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 SDR42E1Q8WUS8 393 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 DCP1AQ9NPI6 582 aaPredicted RBP20.99■□□□□ 0.95
SMG6-212ENST00000573153 GINM1Q9NU53 330 aa20.99■□□□□ 0.95
SMG6-212ENST00000573153 PRKAB2O43741 272 aa20.98■□□□□ 0.95
SMG6-212ENST00000573153 TSHZ3Q63HK5 1081 aa20.98■□□□□ 0.95
SMG6-212ENST00000573153 ARMT1Q9H993 441 aa20.98■□□□□ 0.95
SMG6-212ENST00000573153 SERPINB13Q9UIV8 391 aa20.98■□□□□ 0.95
SMG6-212ENST00000573153 SALL3Q9BXA9 1300 aa20.98■□□□□ 0.95
SMG6-212ENST00000573153 KIAA0100Q14667 2235 aaKnown RBP20.97■□□□□ 0.95
SMG6-212ENST00000573153 GH2P01242 217 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 CYP2D6P10635 497 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 PRMT2P55345 433 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 UBE3CQ15386 1083 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 CRACR2BQ8N4Y2 399 aaPredicted RBP20.97■□□□□ 0.95
SMG6-212ENST00000573153 OTUD7AQ8TE49 926 aaPredicted RBP20.97■□□□□ 0.95
SMG6-212ENST00000573153 SH3TC2Q8TF17 1288 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 BCL11AQ9H165 835 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 EMILIN3Q9NT22 766 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 GABRQQ9UN88 632 aa20.97■□□□□ 0.95
SMG6-212ENST00000573153 HOXA7P31268 230 aaPredicted RBP20.96■□□□□ 0.95
SMG6-212ENST00000573153 PRKCZQ05513 592 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 ARHGEF6Q15052 776 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 CRBNQ96SW2 442 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 ASCC2Q9H1I8 757 aaPredicted RBP20.96■□□□□ 0.95
SMG6-212ENST00000573153 AS3MTQ9HBK9 375 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 ECHDC1Q9NTX5 307 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 PLXNB2O15031 1838 aa20.96■□□□□ 0.95
SMG6-212ENST00000573153 BAZ2AQ9UIF9 1905 aaKnown RBP20.96■□□□□ 0.95
SMG6-212ENST00000573153 MBD4O95243 580 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 KIF22Q14807 665 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 FAM110CQ1W6H9 321 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 SLC9C1Q4G0N8 1177 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 TTC6Q86TZ1 520 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 C12orf42Q96LP6 360 aa20.95■□□□□ 0.94
SMG6-212ENST00000573153 CRNKL1Q9BZJ0 848 aaKnown RBP20.95■□□□□ 0.94
SMG6-212ENST00000573153 PUS7LQ9H0K6 701 aaKnown RBP20.95■□□□□ 0.94
SMG6-212ENST00000573153 DOCK3Q8IZD9 2030 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 PEX10O60683 326 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 ANKRD13CQ8N6S4 541 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 SLC44A5Q8NCS7 719 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 PI4K2BQ8TCG2 481 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
SMG6-212ENST00000573153 MORF4L1Q9UBU8 362 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 MYPNQ86TC9 1320 aa20.94■□□□□ 0.94
SMG6-212ENST00000573153 USP17L10C9JJH3 530 aa20.93■□□□□ 0.94
SMG6-212ENST00000573153 FMNL1O95466 1100 aaPredicted RBP20.93■□□□□ 0.94
SMG6-212ENST00000573153 EN2P19622 333 aaPredicted RBP20.93■□□□□ 0.94
SMG6-212ENST00000573153 MTFR1Q15390 333 aa20.93■□□□□ 0.94
SMG6-212ENST00000573153 ACER1Q8TDN7 264 aa20.93■□□□□ 0.94
SMG6-212ENST00000573153 TXNRD2Q9NNW7 524 aa20.93■□□□□ 0.94
SMG6-212ENST00000573153 MCM9Q9NXL9 1143 aa20.93■□□□□ 0.94
SMG6-212ENST00000573153 PDE4DIPQ5VU43 2346 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 C19orf81C9J6K1 198 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 FCGRTP55899 365 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 KBTBD3Q8NAB2 608 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 SMCR8Q8TEV9 937 aaPredicted RBP20.92■□□□□ 0.94
SMG6-212ENST00000573153 SHISA4Q96DD7 197 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 P2RX7Q99572 595 aaKnown RBP20.92■□□□□ 0.94
SMG6-212ENST00000573153 PNMA3Q9UL41 463 aa20.92■□□□□ 0.94
SMG6-212ENST00000573153 CYP2D7A0A087X1C5 515 aa20.91■□□□□ 0.94
SMG6-212ENST00000573153 CERKLQ49MI3 558 aaPredicted RBP20.91■□□□□ 0.94
SMG6-212ENST00000573153 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
SMG6-212ENST00000573153 TRIM34Q9BYJ4 488 aa20.91■□□□□ 0.94
SMG6-212ENST00000573153 GREB1LQ9C091 1923 aaPredicted RBP20.91■□□□□ 0.94
SMG6-212ENST00000573153 RLFQ13129 1914 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 A0A1W2PRG0 241 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 GRK4P32298 578 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 GCLCP48506 637 aaPredicted RBP20.9■□□□□ 0.94
SMG6-212ENST00000573153 FLT3LGP49771 235 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 AAMPQ13685 434 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 ABCB5Q2M3G0 1257 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 C12orf60Q5U649 245 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 SIAH1Q8IUQ4 282 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 OSBP2Q969R2 916 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.9■□□□□ 0.94
SMG6-212ENST00000573153 KIAA1683Q9H0B3 1180 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 ATP8A2Q9NTI2 1148 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 RBPJLQ9UBG7 517 aa20.9■□□□□ 0.94
SMG6-212ENST00000573153 POLR3DP05423 398 aaPredicted RBP20.89■□□□□ 0.93
SMG6-212ENST00000573153 HERVK_113P62684 666 aa20.89■□□□□ 0.93
SMG6-212ENST00000573153 IRF5Q13568 498 aa20.89■□□□□ 0.93
SMG6-212ENST00000573153 SEPT2Q15019 361 aa20.89■□□□□ 0.93
SMG6-212ENST00000573153 GJD2Q9UKL4 321 aa20.89■□□□□ 0.93
SMG6-212ENST00000573153 TTC41PQ6P2S7 1318 aa20.88■□□□□ 0.93
SMG6-212ENST00000573153 A0A0G2JMZ2 1700 aa20.88■□□□□ 0.93
SMG6-212ENST00000573153 CNMDO75829 334 aa20.88■□□□□ 0.93
SMG6-212ENST00000573153 HOXD10P28358 340 aa20.88■□□□□ 0.93
SMG6-212ENST00000573153 PABPC4Q13310 644 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMG6-212ENST00000573153 KIAA1755Q5JYT7 1200 aa20.88■□□□□ 0.93
SMG6-212ENST00000573153 USP17L2Q6R6M4 530 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms