RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 CNOT4O95628 575 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 OAS2P29728 719 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 CYP2C19P33261 490 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 DEKP35659 375 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 CCNFP41002 786 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 CRKP46108 304 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 IREB2P48200 963 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 MMP14P50281 582 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SCNN1DP51172 638 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 MAP3K10Q02779 954 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 KCNC4Q03721 635 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 ADCY1Q08828 1119 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SFSWAPQ12872 951 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 PRKG2Q13237 762 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 GRM3Q14832 879 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 NBPF9Q3BBW0 867 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 ARHGAP29Q52LW3 1261 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 KIAA0319Q5VV43 1072 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 ERICH6BQ5W0A0 696 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 IQCEQ6IPM2 695 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 FAM196AQ6ZSG2 479 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 C1orf122Q6ZSJ8 110 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 LHFPL2Q6ZUX7 228 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SV2BQ7L1I2 683 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 UBE2Q1Q7Z7E8 422 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SLC9A9Q8IVB4 645 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 FAM178BQ8IXR5 827 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 LRRC47Q8N1G4 583 aaKnown RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 CNTD1Q8N815 330 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 ANKK1Q8NFD2 765 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SNX29Q8TEQ0 813 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 TRIM44Q96DX7 344 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 IFT43Q96FT9 208 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 CARD14Q9BXL6 1004 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 TRIM8Q9BZR9 551 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SUV39H2Q9H5I1 410 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 ZFYVE28Q9HCC9 887 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 SCHIP1Q9P0W5 487 aaPredicted RBP5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 PPM1HQ9ULR3 514 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 TMCC3Q9ULS5 477 aa5.97□□□□□ -1.45
TOPBP1-210ENST00000572787 KAT6BQ8WYB5 2073 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 GTPBP10A4D1E9 387 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 IQCA1LA6NCM1 817 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 A6NHS1 94 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 ADCY3O60266 1144 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 INHAP05111 366 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 ZNF165P49910 485 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 APBA1Q02410 837 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 CAMK2GQ13555 558 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 HGSNATQ68CP4 663 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 BRICD5Q6PL45 260 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 BLOC1S3Q6QNY0 202 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 IGF2-ASQ6U949 168 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 OTOP3Q7RTS5 596 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 C19orf47Q8N9M1 422 aaKnown RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 RBBP8NLQ8NC74 664 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 NUP133Q8WUM0 1156 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 POF1BQ8WVV4 589 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 CCT6BQ92526 530 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 SLC10A4Q96EP9 437 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 AP1M1Q9BXS5 423 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 LRRC3Q9BY71 257 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 PDGFDQ9GZP0 370 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 OSBPL5Q9H0X9 879 aaPredicted RBP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 NPHS2Q9NP85 383 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 SERTAD1Q9UHV2 236 aa5.96□□□□□ -1.46
TOPBP1-210ENST00000572787 MAGEB6P1A0A0J9YX57 407 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 A0A1B0GVC2 190 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 LCE2BO14633 110 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 PPFIA3O75145 1194 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 SNUPNO95149 360 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 IGHDP01880 384 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 CCND1P24385 295 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 MCM4P33991 863 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 MAPK9P45984 424 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 ZNF131P52739 623 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 DGKZQ13574 1117 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 MAP3K11Q16584 847 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 RTN1Q16799 776 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 PTPN21Q16825 1174 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 PRR16Q569H4 304 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 XRRA1Q6P2D8 792 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 C6orf15Q6UXA7 325 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 LDHAL6AQ6ZMR3 332 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 BRINP3Q76B58 766 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 SAPCD2Q86UD0 394 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 SNX32Q86XE0 403 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 PARD3BQ8TEW8 1205 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 NELL1Q92832 810 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 JARID2Q92833 1246 aaPredicted RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 TBC1D20Q96BZ9 403 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 CCDC34Q96HJ3 373 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 EIF2AK1Q9BQI3 630 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 DHRS4Q9BTZ2 278 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 ISCA1Q9BUE6 129 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 CD248Q9HCU0 757 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 TRMT13Q9NUP7 481 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 ARHGAP28Q9P2N2 729 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 FOXD3Q9UJU5 478 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms