RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 GPAA1O43292 621 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 CERKLQ49MI3 558 aaPredicted RBP24.82■■□□□ 1.56
CHMP6-204ENST00000572778 SEC62Q99442 399 aaKnown RBP24.82■■□□□ 1.56
CHMP6-204ENST00000572778 GINM1Q9NU53 330 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 ZBTB21Q9ULJ3 1066 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 LAMB1P07942 1786 aa24.82■■□□□ 1.56
CHMP6-204ENST00000572778 DOCK1Q14185 1865 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 TRIM6-TRIM34B2RNG4 842 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 GH2P01242 217 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 SHMT1P34896 483 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 GABPAQ06546 454 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 ZMYM1Q5SVZ6 1142 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 GPAT2Q6NUI2 795 aa24.81■■□□□ 1.56
CHMP6-204ENST00000572778 CYP2D7A0A087X1C5 515 aa24.8■■□□□ 1.56
CHMP6-204ENST00000572778 DYNLL2Q96FJ2 89 aa24.8■■□□□ 1.56
CHMP6-204ENST00000572778 MYH1P12882 1939 aa24.8■■□□□ 1.56
CHMP6-204ENST00000572778 CASP8AP2Q9UKL3 1982 aa24.8■■□□□ 1.56
CHMP6-204ENST00000572778 GSG1L2A8MUP6 293 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 APPP05067 770 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 GNAT2P19087 354 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 ABCB5Q2M3G0 1257 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 C12orf60Q5U649 245 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 CTR9Q6PD62 1173 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 CTU1Q7Z7A3 348 aaKnown RBP24.79■■□□□ 1.56
CHMP6-204ENST00000572778 RILPL2Q969X0 211 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 WDR18Q9BV38 432 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 MCOLN1Q9GZU1 580 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 OSBPL3Q9H4L5 887 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 CABP5Q9NP86 173 aa24.79■■□□□ 1.56
CHMP6-204ENST00000572778 SP3Q02447 781 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 RAB3GAP1Q15042 981 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 SLC44A5Q8NCS7 719 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 SWAP70Q9UH65 585 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 NAV1Q8NEY1 1877 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 MYH7P12883 1935 aa24.78■■□□□ 1.56
CHMP6-204ENST00000572778 MPHOSPH10O00566 681 aaKnown RBP24.77■■□□□ 1.56
CHMP6-204ENST00000572778 TLR2O60603 784 aa24.77■■□□□ 1.56
CHMP6-204ENST00000572778 HMGCS2P54868 508 aa24.77■■□□□ 1.56
CHMP6-204ENST00000572778 GIMAP6Q6P9H5 292 aa24.77■■□□□ 1.56
CHMP6-204ENST00000572778 ARPP21Q9UBL0 812 aaPredicted RBP24.77■■□□□ 1.56
CHMP6-204ENST00000572778 DDX60LQ5H9U9 1706 aaKnown RBP24.77■■□□□ 1.56
CHMP6-204ENST00000572778 SMIM22K7EJ46 135 aa24.76■■□□□ 1.55
CHMP6-204ENST00000572778 TDO2P48775 406 aa24.76■■□□□ 1.55
CHMP6-204ENST00000572778 MTMR2Q13614 643 aa24.76■■□□□ 1.55
CHMP6-204ENST00000572778 IFFO2Q5TF58 517 aa24.76■■□□□ 1.55
CHMP6-204ENST00000572778 PARK7Q99497 189 aaKnown RBP24.76■■□□□ 1.55
CHMP6-204ENST00000572778 PATL2C9JE40 543 aaKnown RBP24.75■■□□□ 1.55
CHMP6-204ENST00000572778 USP17L10C9JJH3 530 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 CYP2C8P10632 490 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 CDK8P49336 464 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 BACE1P56817 501 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 TREML2Q5T2D2 321 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 PROCA1Q8NCQ7 364 aaPredicted RBP24.75■■□□□ 1.55
CHMP6-204ENST00000572778 CD99L2Q8TCZ2 262 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 ERO1AQ96HE7 468 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 CPA4Q9UI42 421 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 AGTPBP1Q9UPW5 1226 aa24.75■■□□□ 1.55
CHMP6-204ENST00000572778 MINDY4BA8MYZ0 360 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 CAPN15O75808 1086 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 PDE4AP27815 886 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 SBK1Q52WX2 424 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 SH3D19Q5HYK7 790 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 CCDC129Q6ZRS4 1044 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 ABHD8Q96I13 439 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 EPB41L4AQ9HCS5 686 aaPredicted RBP24.74■■□□□ 1.55
CHMP6-204ENST00000572778 TMOD4Q9NZQ9 345 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 TAOK2Q9UL54 1235 aa24.74■■□□□ 1.55
CHMP6-204ENST00000572778 C16orf86Q6ZW13 317 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 IFNL3Q8IZI9 196 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 STK11IPQ8N1F8 1099 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 NACAP1Q9BZK3 213 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 HELLSQ9NRZ9 838 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 SLC45A1Q9Y2W3 748 aa24.73■■□□□ 1.55
CHMP6-204ENST00000572778 C19orf81C9J6K1 198 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 SEPT2Q15019 361 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 C17orf99Q6UX52 265 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 FAM227BQ96M60 508 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 FEZ1Q99689 392 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 TRIM17Q9Y577 477 aa24.72■■□□□ 1.55
CHMP6-204ENST00000572778 PHIPQ8WWQ0 1821 aa24.71■■□□□ 1.55
CHMP6-204ENST00000572778 ATAD5Q96QE3 1844 aa24.71■■□□□ 1.55
CHMP6-204ENST00000572778 PABPC4Q13310 644 aaKnown RBP eCLIP24.71■■□□□ 1.55
CHMP6-204ENST00000572778 ZYXQ15942 572 aaKnown RBP24.71■■□□□ 1.55
CHMP6-204ENST00000572778 TICAM2Q86XR7 235 aa24.71■■□□□ 1.55
CHMP6-204ENST00000572778 SMCR8Q8TEV9 937 aaPredicted RBP24.71■■□□□ 1.55
CHMP6-204ENST00000572778 A0A0D9SFI3 127 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 AKR1B1P15121 316 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 GUCY1A2P33402 732 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 NMIQ13287 307 aaPredicted RBP24.7■■□□□ 1.54
CHMP6-204ENST00000572778 PKN2Q16513 984 aaKnown RBP24.7■■□□□ 1.54
CHMP6-204ENST00000572778 CCDC17Q96LX7 622 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 NAPBQ9H115 298 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 EFCC1Q9HA90 598 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 PNMA3Q9UL41 463 aa24.7■■□□□ 1.54
CHMP6-204ENST00000572778 ADGRA2Q96PE1 1338 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 ECM2O94769 699 aaPredicted RBP24.69■■□□□ 1.54
CHMP6-204ENST00000572778 SDSP20132 328 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 OSBPP22059 807 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 KIF22Q14807 665 aa24.69■■□□□ 1.54
CHMP6-204ENST00000572778 MCMDC2Q4G0Z9 681 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms