RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 SERPINA10Q9UK55 444 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 FOCADQ5VW36 1801 aa23.96■■□□□ 1.43
CHRNE-202ENST00000572438 STK36Q9NRP7 1315 aa23.95■■□□□ 1.43
CHRNE-202ENST00000572438 CALM1P0DP23 149 aa23.95■■□□□ 1.42
CHRNE-202ENST00000572438 CALM2P0DP24 149 aa23.95■■□□□ 1.42
CHRNE-202ENST00000572438 CALM3P0DP25 149 aa23.95■■□□□ 1.42
CHRNE-202ENST00000572438 ZNF444Q8N0Y2 327 aaPredicted RBP23.95■■□□□ 1.42
CHRNE-202ENST00000572438 PHKBQ93100 1093 aa23.95■■□□□ 1.42
CHRNE-202ENST00000572438 DDX4Q9NQI0 724 aaKnown RBP23.95■■□□□ 1.42
CHRNE-202ENST00000572438 ADAMTSL1Q8N6G6 1762 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 DDAH1O94760 285 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 RASA1P20936 1047 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 CDK8P49336 464 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 KRT85P78386 507 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 CSPP1Q1MSJ5 1256 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 CCDC178Q5BJE1 867 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 TTC6Q86TZ1 520 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 CD2APQ9Y5K6 639 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 FIBPO43427 364 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 FMNL1O95466 1100 aaPredicted RBP23.94■■□□□ 1.42
CHRNE-202ENST00000572438 MBD3O95983 291 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 SSRP1Q08945 709 aaKnown RBP23.94■■□□□ 1.42
CHRNE-202ENST00000572438 FAM173BQ6P4H8 233 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 FBXO18Q8NFZ0 1043 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 GPT2Q8TD30 523 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 TCP11L1Q9NUJ3 509 aa23.94■■□□□ 1.42
CHRNE-202ENST00000572438 PPP1R1BQ9UD71 204 aaPredicted RBP23.94■■□□□ 1.42
CHRNE-202ENST00000572438 TSPY3P0CV98 308 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 TSPY8P0CW00 308 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 GUCY1B3Q02153 619 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 TROAPQ12815 778 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 DGKHQ86XP1 1220 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 IL17RBQ9NRM6 502 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 MYO3BQ8WXR4 1341 aa23.93■■□□□ 1.42
CHRNE-202ENST00000572438 RBM5P52756 815 aaKnown RBP eCLIP23.92■■□□□ 1.42
CHRNE-202ENST00000572438 RCSD1Q6JBY9 416 aa23.92■■□□□ 1.42
CHRNE-202ENST00000572438 ANKS1AQ92625 1134 aa23.92■■□□□ 1.42
CHRNE-202ENST00000572438 ALG1Q9BT22 464 aa23.92■■□□□ 1.42
CHRNE-202ENST00000572438 SLC26A6Q9BXS9 759 aa23.92■■□□□ 1.42
CHRNE-202ENST00000572438 OSBPL5Q9H0X9 879 aaPredicted RBP23.92■■□□□ 1.42
CHRNE-202ENST00000572438 COL4A5P29400 1685 aa23.91■■□□□ 1.42
CHRNE-202ENST00000572438 MYH1P12882 1939 aa23.91■■□□□ 1.42
CHRNE-202ENST00000572438 OTUD7BQ6GQQ9 843 aa23.91■■□□□ 1.42
CHRNE-202ENST00000572438 RSBN1LQ6PCB5 846 aaPredicted RBP23.91■■□□□ 1.42
CHRNE-202ENST00000572438 TRIM22Q8IYM9 498 aa23.91■■□□□ 1.42
CHRNE-202ENST00000572438 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
CHRNE-202ENST00000572438 PCDHAC2Q9Y5I4 1007 aa23.91■■□□□ 1.42
CHRNE-202ENST00000572438 VIL1P09327 827 aaKnown RBP23.9■■□□□ 1.42
CHRNE-202ENST00000572438 PTGER2P43116 358 aa23.9■■□□□ 1.42
CHRNE-202ENST00000572438 NFIAQ12857 509 aa23.9■■□□□ 1.42
CHRNE-202ENST00000572438 NBPF11Q86T75 865 aa23.9■■□□□ 1.42
CHRNE-202ENST00000572438 CRACR2BQ8N4Y2 399 aaPredicted RBP23.9■■□□□ 1.42
CHRNE-202ENST00000572438 WASF1Q92558 559 aa23.9■■□□□ 1.42
CHRNE-202ENST00000572438 ZNRF3Q9ULT6 936 aa23.9■■□□□ 1.42
CHRNE-202ENST00000572438 GADD45BO75293 160 aaPredicted RBP23.89■■□□□ 1.42
CHRNE-202ENST00000572438 GABPAQ06546 454 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 NIM1KQ8IY84 436 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 KLHL34Q8N239 644 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 NEDD1Q8NHV4 660 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 AIFM3Q96NN9 605 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 SCAND2PQ9GZW5 306 aaPredicted RBP23.89■■□□□ 1.42
CHRNE-202ENST00000572438 KAT14Q9H8E8 782 aa23.89■■□□□ 1.42
CHRNE-202ENST00000572438 PSME4Q14997 1843 aa23.89■■□□□ 1.41
CHRNE-202ENST00000572438 PSMD14O00487 310 aa23.89■■□□□ 1.41
CHRNE-202ENST00000572438 RAD17O75943 681 aa23.89■■□□□ 1.41
CHRNE-202ENST00000572438 IDI2Q9BXS1 227 aa23.89■■□□□ 1.41
CHRNE-202ENST00000572438 TAOK3Q9H2K8 898 aa23.89■■□□□ 1.41
CHRNE-202ENST00000572438 GJB4Q9NTQ9 266 aa23.88■■□□□ 1.41
CHRNE-202ENST00000572438 BRCA1P38398 1863 aaKnown RBP23.88■■□□□ 1.41
CHRNE-202ENST00000572438 NPM3O75607 178 aaKnown RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 ELP1O95163 1332 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 UBE2HP62256 183 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 TCHHQ07283 1943 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 CFAP100Q494V2 611 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 CMTR1Q8N1G2 835 aaKnown RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 CTCFLQ8NI51 663 aaPredicted RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 GMLQ99445 158 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 SERPINB13Q9UIV8 391 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 DEXIO95424 95 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 HLA-DOAP06340 250 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 DEKP35659 375 aaKnown RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 CAVIN1Q6NZI2 390 aaKnown RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 RNF26Q9BY78 433 aaPredicted RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 TFIP11Q9UBB9 837 aaKnown RBP23.87■■□□□ 1.41
CHRNE-202ENST00000572438 SWAP70Q9UH65 585 aa23.87■■□□□ 1.41
CHRNE-202ENST00000572438 ECM29Q5VYK3 1845 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 TRIM29Q14134 588 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 KRT40Q6A162 431 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 ATL3Q6DD88 541 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 TMTC3Q6ZXV5 915 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 CCDC82Q8N4S0 544 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 MAP3K14Q99558 947 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 CFAP45Q9UL16 551 aa23.86■■□□□ 1.41
CHRNE-202ENST00000572438 UBE2Q2LH0YL09 131 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 CACNB3P54284 484 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 FUT2Q10981 343 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 SPATA32Q96LK8 384 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 EHD4Q9H223 541 aa23.85■■□□□ 1.41
CHRNE-202ENST00000572438 FAM198AQ9UFP1 575 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms