RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 SGMS1Q86VZ5 419 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 STK11IPQ8N1F8 1099 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 TRPM4Q8TD43 1214 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 IGDCC4Q8TDY8 1250 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 ANKS1AQ92625 1134 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDRT1-206ENST00000571263 PGAP2Q9UHJ9 254 aa14.01□□□□□ -0.17
CDRT1-206ENST00000571263 CCDC69A6NI79 296 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 SH2B2O14492 632 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 PRDM1O75626 825 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 EGFRP00533 1210 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 HSP90AA1P07900 732 aaKnown RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 CALM1P0DP23 149 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 CALM2P0DP24 149 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 CALM3P0DP25 149 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 HIRAP54198 1017 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 ANTXR2P58335 489 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 TOB2Q14106 344 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 CERKLQ49MI3 558 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 SULF1Q8IWU6 871 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 BRF1Q92994 677 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 INTS4Q96HW7 963 aaKnown RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 TAF1DQ9H5J8 278 aaPredicted RBP14□□□□□ -0.17
CDRT1-206ENST00000571263 CABP5Q9NP86 173 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 INCENPQ9NQS7 918 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 WDR90Q96KV7 1748 aa14□□□□□ -0.17
CDRT1-206ENST00000571263 PLIN4Q96Q06 1357 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 SHMT1P34896 483 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 NFXL1Q6ZNB6 911 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 TMX3Q96JJ7 454 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 TMEM39BQ9GZU3 492 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 GGA3Q9NZ52 723 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.99□□□□□ -0.17
CDRT1-206ENST00000571263 TACC3Q9Y6A5 838 aa13.99□□□□□ -0.17
CDRT1-206ENST00000571263 TNKSO95271 1327 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 CCDC196A0A1B0GTZ2 297 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 PDIA4P13667 645 aaKnown RBP13.98□□□□□ -0.17
CDRT1-206ENST00000571263 CUL4AQ13619 759 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 SEC23AQ15436 765 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 SLC4A8Q2Y0W8 1093 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 FAM47AQ5JRC9 791 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 IFIT1BQ5T764 474 aaKnown RBP13.98□□□□□ -0.17
CDRT1-206ENST00000571263 TMEM179Q6ZVK1 233 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 CHST3Q7LGC8 479 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 TEPSINQ96N21 525 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 SLKQ9H2G2 1235 aaPredicted RBP13.98□□□□□ -0.17
CDRT1-206ENST00000571263 KANSL2Q9H9L4 492 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 LY9Q9HBG7 655 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 CWC22Q9HCG8 908 aaKnown RBP13.98□□□□□ -0.17
CDRT1-206ENST00000571263 TPCN1Q9ULQ1 816 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 SLC12A7Q9Y666 1083 aa13.98□□□□□ -0.17
CDRT1-206ENST00000571263 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
CDRT1-206ENST00000571263 NF2P35240 595 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 NOVP48745 357 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 ABCB5Q2M3G0 1257 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 CPLX2Q6PUV4 134 aaKnown RBP13.97□□□□□ -0.17
CDRT1-206ENST00000571263 CDC37L1Q7L3B6 337 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 CATIPQ7Z7H3 387 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 TCEANC2Q96MN5 208 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 MAP3K14Q99558 947 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 KAT14Q9H8E8 782 aa13.97□□□□□ -0.17
CDRT1-206ENST00000571263 KLF18A0A0U1RQI7 1052 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 SMIM22K7EJ46 135 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 ZBTB43O43298 467 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 PFKFB2O60825 505 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 DDAH1O94760 285 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 PDIA3P30101 505 aaKnown RBP13.96□□□□□ -0.17
CDRT1-206ENST00000571263 EVX2Q03828 476 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.17
CDRT1-206ENST00000571263 SLC44A5Q8NCS7 719 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
CDRT1-206ENST00000571263 LLPHQ9BRT6 129 aaKnown RBP13.96□□□□□ -0.17
CDRT1-206ENST00000571263 IGKV6D-41A0A0C4DH26 115 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 POTECB2RU33 542 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 MPHOSPH10O00566 681 aaKnown RBP13.95□□□□□ -0.18
CDRT1-206ENST00000571263 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
CDRT1-206ENST00000571263 CDKL5O76039 1030 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 TTLL1O95922 423 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 ASNSP08243 561 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 TOP1P11387 765 aaKnown RBP13.95□□□□□ -0.18
CDRT1-206ENST00000571263 ME3Q16798 604 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 KRT26Q7Z3Y9 468 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 DNAJC18Q9H819 358 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 IL17RBQ9NRM6 502 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 MTMR4Q9NYA4 1195 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 NYAP2Q9P242 653 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 KIF3AQ9Y496 699 aa13.95□□□□□ -0.18
CDRT1-206ENST00000571263 ASTN2O75129 1339 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 PPP1R12BO60237 982 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 AKR1B1P15121 316 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 CAP2P40123 477 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 METAP2P50579 478 aaKnown RBP eCLIP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms