RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 KNDC1Q76NI1 1749 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 ZEB2O60315 1214 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 PAK1Q13153 545 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 PRDM1O75626 825 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 NAPAP54920 295 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 TTC38Q5R3I4 469 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 FBXO38Q6PIJ6 1188 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 SARM1Q6SZW1 724 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
PCDHGA4-201ENST00000571252 IGKV5-2P06315 115 aa12.52□□□□□ -0.4
PCDHGA4-201ENST00000571252 ARID5AQ03989 594 aa12.52□□□□□ -0.4
PCDHGA4-201ENST00000571252 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.4
PCDHGA4-201ENST00000571252 WWC3Q9ULE0 1092 aa12.52□□□□□ -0.4
PCDHGA4-201ENST00000571252 IKBKBO14920 756 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 STX10O60499 249 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 EPHA10Q5JZY3 1008 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 TTLL7Q6ZT98 887 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 PIK3AP1Q6ZUJ8 805 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 SLF2Q8IX21 1173 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 MAST3O60307 1309 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 MAP2K1Q02750 393 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA8FQ08AF8 430 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA8DPQ0D2H9 430 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 PTPN21Q16825 1174 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 AKNAD1Q5T1N1 836 aa12.52□□□□□ -0.41
PCDHGA4-201ENST00000571252 ZMYM6O95789 1325 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 CCDC144BQ3MJ40 725 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 PCDH11XQ9BZA7 1347 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 PCDH11YQ9BZA8 1340 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 SEPT7Q16181 437 aaKnown RBP12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 IFT81Q8WYA0 676 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 MCM9Q9NXL9 1143 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 VPS54Q9P1Q0 977 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 PLA2G4DQ86XP0 818 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 DDX41Q9UJV9 622 aaKnown RBP12.51□□□□□ -0.41
PCDHGA4-201ENST00000571252 FCHSD1Q86WN1 690 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 CSGALNACT2Q8N6G5 542 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 PLCD4Q9BRC7 762 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 NOC4LQ9BVI4 516 aaKnown RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 ATP2C2O75185 946 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 CFAP58Q5T655 872 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 RABGGTAQ92696 567 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 RPAP1Q9BWH6 1393 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 SEC31AO94979 1220 aaKnown RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 RFC4P35249 363 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 TRIML1Q8N9V2 468 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 LPIN2Q92539 896 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 ATP1A3P13637 1013 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 CLCN6P51797 869 aa12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 PUS3Q9BZE2 481 aaKnown RBP12.5□□□□□ -0.41
PCDHGA4-201ENST00000571252 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 CCDC51Q96ER9 411 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 KCNF1Q9H3M0 494 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 PPP2R5BQ15173 497 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 PDE6AP16499 860 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 PDE4DQ08499 809 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GDAP1L1Q96MZ0 367 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 SELENOOQ9BVL4 669 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA6CA6NDK9 693 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 PDE8AO60658 829 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA6DP0CG33 693 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 KRT79Q5XKE5 535 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 APOA5Q6Q788 366 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 NELFBQ8WX92 580 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GPR108Q9NPR9 543 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 GOLGA6AQ9NYA3 693 aa12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 NPHP4O75161 1426 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA4-201ENST00000571252 PHLPP2Q6ZVD8 1323 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 PPP6R2O75170 966 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 PLCD1P51178 756 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 DNAJC10Q8IXB1 793 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 ADORA1P30542 326 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 TERF2Q15554 542 aa12.48□□□□□ -0.41
PCDHGA4-201ENST00000571252 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms