RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 GCLCP48506 637 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 HMGCS2P54868 508 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 TTC6Q86TZ1 520 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SMCR8Q8TEV9 937 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 HAUS7Q99871 368 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 DCTPP1Q9H773 170 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 PAG1Q9NWQ8 432 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 MYH8P13535 1937 aa20.72■□□□□ 0.91
MAP1LC3B-208ENST00000570189 HOXA7P31268 230 aaPredicted RBP20.71■□□□□ 0.91
MAP1LC3B-208ENST00000570189 JAG1P78504 1218 aa20.71■□□□□ 0.91
MAP1LC3B-208ENST00000570189 SAP30BPQ9UHR5 308 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3B-208ENST00000570189 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
MAP1LC3B-208ENST00000570189 FMNL1O95466 1100 aaPredicted RBP20.7■□□□□ 0.9
MAP1LC3B-208ENST00000570189 DNAJC2Q99543 621 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3B-208ENST00000570189 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
MAP1LC3B-208ENST00000570189 CRNKL1Q9BZJ0 848 aaKnown RBP20.7■□□□□ 0.9
MAP1LC3B-208ENST00000570189 MYPNQ86TC9 1320 aa20.7■□□□□ 0.9
MAP1LC3B-208ENST00000570189 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
MAP1LC3B-208ENST00000570189 ADD2P35612 726 aa20.69■□□□□ 0.9
MAP1LC3B-208ENST00000570189 GABPAQ06546 454 aa20.69■□□□□ 0.9
MAP1LC3B-208ENST00000570189 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 IRF5Q13568 498 aa20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 MTMR2Q13614 643 aa20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 UBE3CQ15386 1083 aa20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 C12orf42Q96LP6 360 aa20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3B-208ENST00000570189 GDF11O95390 407 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 GRK4P32298 578 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 SLAIN1Q8ND83 568 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 RAET1EQ8TD07 263 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 PXYLP1Q8TE99 480 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 SH3TC2Q8TF17 1288 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 BOLA2Q9H3K6 86 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 DCP1AQ9NPI6 582 aaPredicted RBP20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 MORF4L1Q9UBU8 362 aa20.67■□□□□ 0.9
MAP1LC3B-208ENST00000570189 SHMT1P34896 483 aa20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 PLCD1P51178 756 aa20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 PRKCZQ05513 592 aa20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 SHROOM1Q2M3G4 852 aaPredicted RBP20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 PRPF38BQ5VTL8 546 aaKnown RBP20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 EDC3Q96F86 508 aaKnown RBP20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 PLXNB2O15031 1838 aa20.66■□□□□ 0.9
MAP1LC3B-208ENST00000570189 GH2P01242 217 aa20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 CERKLQ49MI3 558 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 LCORLQ8N3X6 602 aa20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 GTF3C2Q8WUA4 911 aaPredicted RBP20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 ATP8A2Q9NTI2 1148 aa20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
MAP1LC3B-208ENST00000570189 TNPO2O14787 897 aaKnown RBP20.64■□□□□ 0.89
MAP1LC3B-208ENST00000570189 CAPN2P17655 700 aa20.64■□□□□ 0.89
MAP1LC3B-208ENST00000570189 EN2P19622 333 aaPredicted RBP20.64■□□□□ 0.89
MAP1LC3B-208ENST00000570189 ZSCAN25Q6NSZ9 544 aa20.64■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L2Q6R6M4 530 aa20.64■□□□□ 0.89
MAP1LC3B-208ENST00000570189 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP14P54578 494 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 RRP1P56182 461 aaKnown RBP20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 ABCB5Q2M3G0 1257 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 SLC4A8Q2Y0W8 1093 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 COA7Q96BR5 231 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 KIAA1683Q9H0B3 1180 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 EMILIN3Q9NT22 766 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 MCM9Q9NXL9 1143 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GABRQQ9UN88 632 aa20.63■□□□□ 0.89
MAP1LC3B-208ENST00000570189 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 FLT3LGP49771 235 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 HERVK_113P62684 666 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 UBXN2AP68543 259 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 IRX3P78415 501 aaPredicted RBP20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 NKX2-3Q8TAU0 364 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 SDR42E1Q8WUS8 393 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GPATCH3Q96I76 525 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 CABP5Q9NP86 173 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
MAP1LC3B-208ENST00000570189 MBD4O95243 580 aa20.61■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GUCY1A2P33402 732 aa20.61■□□□□ 0.89
MAP1LC3B-208ENST00000570189 P2RX7Q99572 595 aaKnown RBP20.61■□□□□ 0.89
MAP1LC3B-208ENST00000570189 ARMT1Q9H993 441 aa20.61■□□□□ 0.89
MAP1LC3B-208ENST00000570189 PCDHB15Q9Y5E8 787 aa20.61■□□□□ 0.89
MAP1LC3B-208ENST00000570189 ADCY3O60266 1144 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GJB1P08034 283 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 MTFR1Q15390 333 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 LBX2Q6XYB7 198 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 KBTBD3Q8NAB2 608 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 RLFQ13129 1914 aa20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GREB1LQ9C091 1923 aaPredicted RBP20.6■□□□□ 0.89
MAP1LC3B-208ENST00000570189 TTC41PQ6P2S7 1318 aa20.59■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GJA8P48165 433 aa20.59■□□□□ 0.89
MAP1LC3B-208ENST00000570189 RAB3GAP1Q15042 981 aa20.59■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GJD2Q9UKL4 321 aa20.59■□□□□ 0.89
MAP1LC3B-208ENST00000570189 A0A0G2JMZ2 1700 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 PARP14Q460N5 1801 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L15C9J2P7 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L11C9JVI0 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L18D6R9N7 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L22D6RA61 530 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms