RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 PPP6R2O75170 966 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 NAPAP54920 295 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 RBM10P98175 930 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 DIXDC1Q155Q3 683 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 GPR101Q96P66 508 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 MTA3Q9BTC8 594 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 GOLPH3LQ9H4A5 285 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 VWA3AA6NCI4 1184 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 UBA7P41226 1012 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 GTF2IP78347 998 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 HSP90AA4PQ58FG1 418 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 C3orf67Q6ZVT6 689 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 BTDP43251 543 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 PPFIBP1Q86W92 1011 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 TDRD7Q8NHU6 1098 aaKnown RBP13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 STK36Q9NRP7 1315 aa13.31□□□□□ -0.28
PDXDC1-217ENST00000570001 BBOX1O75936 387 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 TTC38Q5R3I4 469 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 DPP8Q6V1X1 898 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 CCDC112Q8NEF3 446 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 A0A087WWV3 80 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 USP17L8P0C7I0 530 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 SKILP12757 684 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 MYL5Q02045 173 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 NR5A1Q13285 461 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 FBXL16Q8N461 479 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 EYA3Q99504 573 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 APBA3O96018 575 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 PARP1P09874 1014 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 EVCP57679 992 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 SLC10A5Q5PT55 438 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 C11orf57Q6ZUT1 292 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 DCP1AQ9NPI6 582 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 SIPA1L3O60292 1781 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 PNOCQ13519 176 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 PTPN14Q15678 1187 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 RRP36Q96EU6 259 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 TCP11L1Q9NUJ3 509 aa13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 TRMT1Q9NXH9 659 aaKnown RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
PDXDC1-217ENST00000570001 TNNT1P13805 278 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 CTR9Q6PD62 1173 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 FBXO33Q7Z6M2 555 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 C17orf53Q8N3J3 647 aaPredicted RBP13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 CCDC150Q8NCX0 1101 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 CYP2D6P10635 497 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 SCG2P13521 617 aa13.29□□□□□ -0.28
PDXDC1-217ENST00000570001 RCAN1P53805 252 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 C6orf50Q9HD87 102 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 KLRK1P26718 216 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 STAT6P42226 847 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 POSTNQ15063 836 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 TMED8Q6PL24 325 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 FMR1NBQ8N0W7 255 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 NLGN1Q8N2Q7 840 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 ALDH1B1P30837 517 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 RBM6P78332 1123 aaKnown RBP13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 IQUBQ8NA54 791 aa13.28□□□□□ -0.28
PDXDC1-217ENST00000570001 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 PLEKHA8P1O95397 391 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 FERMT2Q96AC1 680 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 PRIMPOLQ96LW4 560 aa13.27□□□□□ -0.28
PDXDC1-217ENST00000570001 PPEF1O14829 653 aaPredicted RBP13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 PRPF3O43395 683 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 GNA11P29992 359 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 DPCR1Q3MIW9 517 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 TIGD1Q96MW7 591 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 IPO7O95373 1038 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 SH3RF3Q8TEJ3 882 aaPredicted RBP13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
PDXDC1-217ENST00000570001 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 PRR5LQ6MZQ0 368 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 RAB34Q9BZG1 259 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 NMT2O60551 498 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 GUCY1A2P33402 732 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 HSPA1LP34931 641 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 PDE6BP35913 854 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 EIF6P56537 245 aaKnown RBP13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 SLC27A3Q5K4L6 730 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 CD209Q9NNX6 404 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 SALL1Q9NSC2 1324 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 ADGRA1Q86SQ6 560 aa13.26□□□□□ -0.29
PDXDC1-217ENST00000570001 FNBP4Q8N3X1 1017 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms