RNA–Protein interactions for RNA: ENST00000569936.5

STRA6-210, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 1 (best)

Gene STRA6, Length 2,151 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-210ENST00000569936 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
STRA6-210ENST00000569936 ECE2O60344 883 aa16.89■□□□□ 0.3
STRA6-210ENST00000569936 KINO60870 393 aaKnown RBP16.89■□□□□ 0.3
STRA6-210ENST00000569936 FAM160A1Q05DH4 1040 aa16.89■□□□□ 0.3
STRA6-210ENST00000569936 NBPF11Q86T75 865 aa16.89■□□□□ 0.3
STRA6-210ENST00000569936 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.3
STRA6-210ENST00000569936 NEK1Q96PY6 1258 aa16.89■□□□□ 0.3
STRA6-210ENST00000569936 FHDC1Q9C0D6 1143 aaPredicted RBP16.89■□□□□ 0.3
STRA6-210ENST00000569936 FAM205AQ6ZU69 1335 aa16.89■□□□□ 0.3
STRA6-210ENST00000569936 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
STRA6-210ENST00000569936 TTLL5Q6EMB2 1281 aa16.89■□□□□ 0.29
STRA6-210ENST00000569936 BPIFA3Q9BQP9 254 aa16.89■□□□□ 0.29
STRA6-210ENST00000569936 ZNF277Q9NRM2 450 aaPredicted RBP16.89■□□□□ 0.29
STRA6-210ENST00000569936 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
STRA6-210ENST00000569936 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
STRA6-210ENST00000569936 SLC20A2Q08357 652 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 E4F1Q66K89 784 aaPredicted RBP16.88■□□□□ 0.29
STRA6-210ENST00000569936 MIGA1Q8NAN2 632 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 ZNF396Q96N95 335 aaPredicted RBP16.88■□□□□ 0.29
STRA6-210ENST00000569936 PFKFB2O60825 505 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 MBD4O95243 580 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 ADGRA1Q86SQ6 560 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 AOPEPQ8N6M6 819 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 NOL10Q9BSC4 688 aaKnown RBP16.88■□□□□ 0.29
STRA6-210ENST00000569936 DSCC1Q9BVC3 393 aa16.88■□□□□ 0.29
STRA6-210ENST00000569936 CYP2C19P33261 490 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 GRIK5Q16478 980 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 Q6ZUG5 572 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 DDX11Q96FC9 970 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 FHOD1Q9Y613 1164 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
STRA6-210ENST00000569936 MAGEB6P1A0A0J9YX57 407 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 IRX5P78411 483 aaPredicted RBP16.87■□□□□ 0.29
STRA6-210ENST00000569936 STRBPQ96SI9 672 aaKnown RBP16.87■□□□□ 0.29
STRA6-210ENST00000569936 ARMT1Q9H993 441 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
STRA6-210ENST00000569936 TULP2O00295 520 aa16.86■□□□□ 0.29
STRA6-210ENST00000569936 GSTO1P78417 241 aa16.86■□□□□ 0.29
STRA6-210ENST00000569936 SCRN1Q12765 414 aa16.86■□□□□ 0.29
STRA6-210ENST00000569936 TMED8Q6PL24 325 aaPredicted RBP16.86■□□□□ 0.29
STRA6-210ENST00000569936 NSUN7Q8NE18 718 aaKnown RBP16.86■□□□□ 0.29
STRA6-210ENST00000569936 VPS33BQ9H267 617 aa16.86■□□□□ 0.29
STRA6-210ENST00000569936 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.86■□□□□ 0.29
STRA6-210ENST00000569936 APPP05067 770 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 LCORLQ8N3X6 602 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 FSIP1Q8NA03 581 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 GOLGB1Q14789 3259 aaKnown RBP16.85■□□□□ 0.29
STRA6-210ENST00000569936 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
STRA6-210ENST00000569936 CLCN6P51797 869 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 ERCC6LQ2NKX8 1250 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 USP28Q96RU2 1077 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 ST7Q9NRC1 585 aa16.85■□□□□ 0.29
STRA6-210ENST00000569936 PSME4Q14997 1843 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 PHLPP2Q6ZVD8 1323 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 DIXDC1Q155Q3 683 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 STRIP1Q5VSL9 837 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 FMR1NBQ8N0W7 255 aaPredicted RBP16.84■□□□□ 0.29
STRA6-210ENST00000569936 CERS5Q8N5B7 392 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 ZNF646O15015 1829 aaPredicted RBP16.84■□□□□ 0.29
STRA6-210ENST00000569936 USP17L3A6NCW0 530 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 USP17L4A6NCW7 530 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
STRA6-210ENST00000569936 CCP110O43303 1012 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 NRDCO43847 1150 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 ZRANB2O95218 330 aaKnown RBP eCLIP16.84■□□□□ 0.29
STRA6-210ENST00000569936 LDHCP07864 332 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 PNMA6AP0CW24 399 aaPredicted RBP16.84■□□□□ 0.29
STRA6-210ENST00000569936 CEBPZQ03701 1054 aaKnown RBP16.84■□□□□ 0.29
STRA6-210ENST00000569936 ARMCX5Q6P1M9 558 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 USP17L1Q7RTZ2 530 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 SYT17Q9BSW7 474 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 SUGT1Q9Y2Z0 365 aa16.84■□□□□ 0.29
STRA6-210ENST00000569936 A0A1W2PQ27 194 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 A0A1W2PQ64 194 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 A0A1W2PQD8 194 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 YDJCA8MPS7 323 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 NFKBIEO00221 500 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 FOXP2O15409 715 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
STRA6-210ENST00000569936 GNAT2P19087 354 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 PLA2G4AP47712 749 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 DYNLL1P63167 89 aaKnown RBP16.83■□□□□ 0.28
STRA6-210ENST00000569936 SYT10Q6XYQ8 523 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 NIM1KQ8IY84 436 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 MRPS27Q92552 414 aaKnown RBP16.83■□□□□ 0.28
STRA6-210ENST00000569936 RIOK1Q9BRS2 568 aaKnown RBP16.83■□□□□ 0.28
STRA6-210ENST00000569936 AATFQ9NY61 560 aaKnown RBP eCLIP16.83■□□□□ 0.28
STRA6-210ENST00000569936 SLC4A4Q9Y6R1 1079 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 COL4A5P29400 1685 aa16.83■□□□□ 0.28
STRA6-210ENST00000569936 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
STRA6-210ENST00000569936 ATP8B1O43520 1251 aa16.82■□□□□ 0.28
STRA6-210ENST00000569936 CTDNEP1O95476 244 aa16.82■□□□□ 0.28
STRA6-210ENST00000569936 SFPQP23246 707 aaKnown RBP eCLIP16.82■□□□□ 0.28
STRA6-210ENST00000569936 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
STRA6-210ENST00000569936 FTOQ9C0B1 505 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms