RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.73■■■□□ 2.03
RAB40C-212ENST00000569575 RASA1P20936 1047 aa27.72■■■□□ 2.03
RAB40C-212ENST00000569575 TCP11L1Q9NUJ3 509 aa27.72■■■□□ 2.03
RAB40C-212ENST00000569575 SNX14Q9Y5W7 946 aa27.72■■■□□ 2.03
RAB40C-212ENST00000569575 TTLL12Q14166 644 aaPredicted RBP27.71■■■□□ 2.03
RAB40C-212ENST00000569575 ABCB5Q2M3G0 1257 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 LDLRAD1Q5T700 205 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 TMEM179Q6ZVK1 233 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 NEK1Q96PY6 1258 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 WRNIP1Q96S55 665 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 ANGEL1Q9UNK9 670 aaKnown RBP27.71■■■□□ 2.03
RAB40C-212ENST00000569575 CSADQ9Y600 493 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 PLIN4Q96Q06 1357 aa27.71■■■□□ 2.03
RAB40C-212ENST00000569575 WDR19Q8NEZ3 1342 aa27.7■■■□□ 2.03
RAB40C-212ENST00000569575 TSPY3P0CV98 308 aa27.7■■■□□ 2.02
RAB40C-212ENST00000569575 TSPY8P0CW00 308 aa27.7■■■□□ 2.02
RAB40C-212ENST00000569575 IQCA1Q86XH1 822 aa27.7■■■□□ 2.02
RAB40C-212ENST00000569575 NEDD1Q8NHV4 660 aa27.7■■■□□ 2.02
RAB40C-212ENST00000569575 TOMM22Q9NS69 142 aa27.7■■■□□ 2.02
RAB40C-212ENST00000569575 TSPY2A6NKD2 308 aa27.69■■■□□ 2.02
RAB40C-212ENST00000569575 CST9Q5W186 159 aa27.69■■■□□ 2.02
RAB40C-212ENST00000569575 RASEFQ8IZ41 740 aa27.69■■■□□ 2.02
RAB40C-212ENST00000569575 SCYL3Q8IZE3 742 aa27.69■■■□□ 2.02
RAB40C-212ENST00000569575 SLC44A5Q8NCS7 719 aa27.69■■■□□ 2.02
RAB40C-212ENST00000569575 RANBP6O60518 1105 aaKnown RBP27.68■■■□□ 2.02
RAB40C-212ENST00000569575 MCM5P33992 734 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 EVX2Q03828 476 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 HHIPL1Q96JK4 782 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 TTC14Q96N46 770 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 ZNF408Q9H9D4 720 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 KANSL2Q9H9L4 492 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 PICK1Q9NRD5 415 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 SYNPO2Q9UMS6 1093 aa27.68■■■□□ 2.02
RAB40C-212ENST00000569575 TMEM88BA6NKF7 163 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 SMIM22K7EJ46 135 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 TFAP4Q01664 338 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 SART3Q15020 963 aaKnown RBP27.67■■■□□ 2.02
RAB40C-212ENST00000569575 DLK2Q6UY11 383 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 TBC1D32Q96NH3 1257 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 NEDD4P46934 1319 aa27.67■■■□□ 2.02
RAB40C-212ENST00000569575 FAM196BA6NMK8 535 aa27.66■■■□□ 2.02
RAB40C-212ENST00000569575 PRDM1O75626 825 aa27.66■■■□□ 2.02
RAB40C-212ENST00000569575 RRP12Q5JTH9 1297 aaKnown RBP27.66■■■□□ 2.02
RAB40C-212ENST00000569575 STOX1Q6ZVD7 989 aa27.66■■■□□ 2.02
RAB40C-212ENST00000569575 DHX32Q7L7V1 743 aaKnown RBP27.66■■■□□ 2.02
RAB40C-212ENST00000569575 ZSWIM5Q9P217 1185 aa27.66■■■□□ 2.02
RAB40C-212ENST00000569575 ZBTB21Q9ULJ3 1066 aa27.66■■■□□ 2.02
RAB40C-212ENST00000569575 B4E1Z4 1266 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 KDM4AO75164 1064 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 BLOC1S2Q6QNY1 142 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.65■■■□□ 2.02
RAB40C-212ENST00000569575 MB21D2Q8IYB1 491 aaPredicted RBP27.65■■■□□ 2.02
RAB40C-212ENST00000569575 TMTC2Q8N394 836 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 TMEM87BQ96K49 555 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 AS3MTQ9HBK9 375 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 ZSWIM6Q9HCJ5 1215 aa27.65■■■□□ 2.02
RAB40C-212ENST00000569575 INPP5BP32019 993 aa27.64■■■□□ 2.02
RAB40C-212ENST00000569575 DGKHQ86XP1 1220 aa27.64■■■□□ 2.02
RAB40C-212ENST00000569575 STK11IPQ8N1F8 1099 aa27.64■■■□□ 2.02
RAB40C-212ENST00000569575 FBXL16Q8N461 479 aa27.64■■■□□ 2.02
RAB40C-212ENST00000569575 TACC3Q9Y6A5 838 aa27.64■■■□□ 2.02
RAB40C-212ENST00000569575 DOCK1Q14185 1865 aa27.64■■■□□ 2.01
RAB40C-212ENST00000569575 ERICH2A1L162 156 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 USP17L5A8MUK1 530 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 MPHOSPH10O00566 681 aaKnown RBP27.63■■■□□ 2.01
RAB40C-212ENST00000569575 GH2P01242 217 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 AKR1B1P15121 316 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 APLP1P51693 650 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 PRKG1Q13976 671 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 ERO1BQ86YB8 467 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 JAKMIP1Q96N16 626 aaKnown RBP27.63■■■□□ 2.01
RAB40C-212ENST00000569575 UBAC1Q9BSL1 405 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 INCENPQ9NQS7 918 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 CYP46A1Q9Y6A2 500 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 TLL2Q9Y6L7 1015 aa27.63■■■□□ 2.01
RAB40C-212ENST00000569575 GREB1LQ9C091 1923 aaPredicted RBP27.63■■■□□ 2.01
RAB40C-212ENST00000569575 IGKV6D-41A0A0C4DH26 115 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 NOVP48745 357 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 PPATQ06203 517 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 FMR1Q06787 632 aaKnown RBP eCLIP27.62■■■□□ 2.01
RAB40C-212ENST00000569575 VGLL4Q14135 290 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 RUFY3Q7L099 469 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 SAPCD2Q86UD0 394 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 ANKS1AQ92625 1134 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 SLC10A4Q96EP9 437 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 WDR18Q9BV38 432 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 SH2D4AQ9H788 454 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 NYAP2Q9P242 653 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 TAF6LQ9Y6J9 622 aa27.62■■■□□ 2.01
RAB40C-212ENST00000569575 RRP1BQ14684 758 aaKnown RBP27.61■■■□□ 2.01
RAB40C-212ENST00000569575 ADCK5Q3MIX3 580 aa27.61■■■□□ 2.01
RAB40C-212ENST00000569575 ZKSCAN4Q969J2 545 aaPredicted RBP27.61■■■□□ 2.01
RAB40C-212ENST00000569575 ZSCAN10Q96SZ4 725 aaPredicted RBP27.61■■■□□ 2.01
RAB40C-212ENST00000569575 CREBZFQ9NS37 354 aa27.61■■■□□ 2.01
RAB40C-212ENST00000569575 MTMR4Q9NYA4 1195 aa27.61■■■□□ 2.01
RAB40C-212ENST00000569575 ATAD5Q96QE3 1844 aa27.61■■■□□ 2.01
RAB40C-212ENST00000569575 SPDYE5A6NIY4 337 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 UBE2Q2LH0YL09 131 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 GDF11O95390 407 aa27.6■■■□□ 2.01
RAB40C-212ENST00000569575 TTLL1O95922 423 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms