RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 DDX4Q9NQI0 724 aaKnown RBP26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 USP40Q9NVE5 1235 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 CCDC196A0A1B0GTZ2 297 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 FIBPO43427 364 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 MBD3O95983 291 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 NCLP19338 710 aaKnown RBP26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 KRT85P78386 507 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 TFAP4Q01664 338 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 TROAPQ12815 778 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 MKNK2Q9HBH9 465 aa26.27■■□□□ 1.8
VCPKMT-205ENST00000569518 DDAH1O94760 285 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 FMNL1O95466 1100 aaPredicted RBP26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 IARSP41252 1262 aaKnown RBP26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 CATIPQ7Z7H3 387 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 ANKS1AQ92625 1134 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 ZNF287Q9HBT7 754 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 IL17RBQ9NRM6 502 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 TCP11L1Q9NUJ3 509 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 FER1L6Q2WGJ9 1857 aa26.26■■□□□ 1.79
VCPKMT-205ENST00000569518 GADD45BO75293 160 aaPredicted RBP26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 CDK8P49336 464 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 GUCY1B3Q02153 619 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 NBPF11Q86T75 865 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 NUP133Q8WUM0 1156 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 ZNF277Q9NRM2 450 aaPredicted RBP26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 SERPINA10Q9UK55 444 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 DEKP35659 375 aaKnown RBP26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 CSPP1Q1MSJ5 1256 aa26.25■■□□□ 1.79
VCPKMT-205ENST00000569518 CALM1P0DP23 149 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 CALM2P0DP24 149 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 CALM3P0DP25 149 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 PICALMQ13492 652 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 DGKHQ86XP1 1220 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 AIFM3Q96NN9 605 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 ALG1Q9BT22 464 aa26.24■■□□□ 1.79
VCPKMT-205ENST00000569518 SSRP1Q08945 709 aaKnown RBP26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 OTUD7BQ6GQQ9 843 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 PCDHAC2Q9Y5I4 1007 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 ELP1O95163 1332 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 GABPAQ06546 454 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 CCDC178Q5BJE1 867 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 DALRD3Q5D0E6 543 aaKnown RBP26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 ZNF444Q8N0Y2 327 aaPredicted RBP26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 LARGE2Q8N3Y3 721 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 CRACR2BQ8N4Y2 399 aaPredicted RBP26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 SLC26A6Q9BXS9 759 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 OSBPL5Q9H0X9 879 aaPredicted RBP26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 GJB4Q9NTQ9 266 aa26.23■■□□□ 1.79
VCPKMT-205ENST00000569518 TSPY3P0CV98 308 aa26.22■■□□□ 1.79
VCPKMT-205ENST00000569518 TSPY8P0CW00 308 aa26.22■■□□□ 1.79
VCPKMT-205ENST00000569518 TTC6Q86TZ1 520 aa26.22■■□□□ 1.79
VCPKMT-205ENST00000569518 CD2APQ9Y5K6 639 aa26.22■■□□□ 1.79
VCPKMT-205ENST00000569518 GOLGB1Q14789 3259 aaKnown RBP26.22■■□□□ 1.79
VCPKMT-205ENST00000569518 UBE2HP62256 183 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 FUT2Q10981 343 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 NFIAQ12857 509 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 SCAND2PQ9GZW5 306 aaPredicted RBP26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 RBM28Q9NW13 759 aaKnown RBP26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 UBE2Q2LH0YL09 131 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 PTGER2P43116 358 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 CAVIN1Q6NZI2 390 aaKnown RBP26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 MYO3BQ8WXR4 1341 aa26.21■■□□□ 1.79
VCPKMT-205ENST00000569518 MYH6P13533 1939 aa26.2■■□□□ 1.79
VCPKMT-205ENST00000569518 MYH8P13535 1937 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 VIL1P09327 827 aaKnown RBP26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 RSBN1LQ6PCB5 846 aaPredicted RBP26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 TRIM22Q8IYM9 498 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 NEDD1Q8NHV4 660 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 GMLQ99445 158 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 IDI2Q9BXS1 227 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 SIPA1L1O43166 1804 aa26.2■■□□□ 1.78
VCPKMT-205ENST00000569518 CMTR1Q8N1G2 835 aaKnown RBP26.19■■□□□ 1.78
VCPKMT-205ENST00000569518 WASF1Q92558 559 aa26.19■■□□□ 1.78
VCPKMT-205ENST00000569518 TFIP11Q9UBB9 837 aaKnown RBP26.19■■□□□ 1.78
VCPKMT-205ENST00000569518 PLIN4Q96Q06 1357 aa26.19■■□□□ 1.78
VCPKMT-205ENST00000569518 NPM3O75607 178 aaKnown RBP26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 GUCY1A2P33402 732 aa26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 KRT40Q6A162 431 aa26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 ATL3Q6DD88 541 aa26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 LEO1Q8WVC0 666 aaPredicted RBP26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 RNF26Q9BY78 433 aaPredicted RBP26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 KIF23Q02241 960 aaPredicted RBP26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 TMTC3Q6ZXV5 915 aa26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 KAT14Q9H8E8 782 aa26.18■■□□□ 1.78
VCPKMT-205ENST00000569518 PSMD14O00487 310 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 PLEKHA8P1O95397 391 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 DEXIO95424 95 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 RBM5P52756 815 aaKnown RBP eCLIP26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 MAP3K14Q99558 947 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 TMEM63CQ9P1W3 806 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 RBM27Q9P2N5 1060 aaKnown RBP26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 ZNRF3Q9ULT6 936 aa26.17■■□□□ 1.78
VCPKMT-205ENST00000569518 PSDA5PKW4 1024 aaPredicted RBP26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 RAD17O75943 681 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 NOVP48745 357 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 BRAPQ7Z569 592 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 SPATA32Q96LK8 384 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 EHD4Q9H223 541 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 FAM198AQ9UFP1 575 aa26.16■■□□□ 1.78
VCPKMT-205ENST00000569518 SERPINB13Q9UIV8 391 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms