RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 UBXN2AP68543 259 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TRIM32Q13049 653 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 FAM110CQ1W6H9 321 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TBC1D9Q6ZT07 1266 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ZGPATQ8N5A5 531 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DEFB118Q96PH6 123 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 FRMPD3Q5JV73 1810 aa13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ARID4AP29374 1257 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 MCAMP43121 646 aa13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 RARSP54136 660 aaKnown RBP13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 POTEEQ6S8J3 1075 aa13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 GJD2Q9UKL4 321 aa13.79□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PNMA6EA0A0J9YXQ4 647 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SRGAP3O43295 1099 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 HMGCS2P54868 508 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PROCA1Q8NCQ7 364 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 LRCH3Q96II8 777 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 HTATIP2Q9BUP3 242 aa13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SPTBN5Q9NRC6 3674 aaKnown RBP13.78□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SPP2Q13103 211 aa13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MVPQ14764 893 aaKnown RBP13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ERICH6Q7L0X2 663 aa13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRFAM7A-206ENST00000569278 CAP2P40123 477 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 AAMPQ13685 434 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SH3D19Q5HYK7 790 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ZNF280CQ8ND82 737 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TRIB2Q92519 343 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PAWRQ96IZ0 340 aaKnown RBP13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ASCC2Q9H1I8 757 aaPredicted RBP13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TRIM27P14373 513 aa13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 RRP1P56182 461 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MAP3K21Q5TCX8 1036 aa13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 GDF15Q99988 308 aa13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MORF4L1Q9UBU8 362 aa13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 STAP2Q9UGK3 403 aa13.75□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PFASO15067 1338 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PRUNE2Q8WUY3 3088 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 A0A1W2PPC1 479 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 HMGCRP04035 888 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MTMR2Q13614 643 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SLF2Q8IX21 1173 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 EFCAB3Q8N7B9 438 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ARHGAP45Q92619 1136 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PNMA3Q9UL41 463 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 AKAP2Q9Y2D5 859 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 NR2E3Q9Y5X4 410 aa13.74□□□□□ -0.21
CHRFAM7A-206ENST00000569278 FLT1P17948 1338 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 EVI5O60447 810 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 COA7Q96BR5 231 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 NEUROD6Q96NK8 337 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 WDR18Q9BV38 432 aa13.73□□□□□ -0.21
CHRFAM7A-206ENST00000569278 USP17L5A8MUK1 530 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MAP4K4O95819 1239 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 GNAI3P08754 354 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 GCLCP48506 637 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 C7orf61Q8IZ16 206 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 USP6NLQ92738 828 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 DBNDD2Q9BQY9 259 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 AATFQ9NY61 560 aaKnown RBP eCLIP13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 RAI14Q9P0K7 980 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 OGDHLQ9ULD0 1010 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ZMYND8Q9ULU4 1186 aaPredicted RBP13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MYH1P12882 1939 aa13.72□□□□□ -0.21
CHRFAM7A-206ENST00000569278 BCAR3O75815 825 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 HOXA7P31268 230 aaPredicted RBP13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 ANKLE1Q8NAG6 615 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SLC39A7Q92504 469 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 P2RX7Q99572 595 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TBC1D2Q9BYX2 928 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PORCNQ9H237 461 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 PIH1D3Q9NQM4 214 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 SNRKQ9NRH2 765 aa13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 TLR7Q9NYK1 1049 aaKnown RBP13.71□□□□□ -0.21
CHRFAM7A-206ENST00000569278 A0A0G2JMZ2 1700 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 RPTORQ8N122 1335 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 LTBP2Q14767 1821 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 CNMDO75829 334 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 GDF11O95390 407 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 MS4A1P11836 297 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 COL6A1P12109 1028 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 BACE1P56817 501 aa13.7□□□□□ -0.22
CHRFAM7A-206ENST00000569278 PPP4CP60510 307 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms