RNA–Protein interactions for RNA: ENST00000569110.1

TSC2-225, Transcript of TSC complex subunit 2, humanhuman

TSL 5

Gene TSC2, Length 1,687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-225ENST00000569110 GMPSP49915 693 aaPredicted RBP19.43■□□□□ 0.7
TSC2-225ENST00000569110 SPDYE2Q495Y8 402 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 ZNF444Q8N0Y2 327 aaPredicted RBP19.43■□□□□ 0.7
TSC2-225ENST00000569110 NSUN7Q8NE18 718 aaKnown RBP19.43■□□□□ 0.7
TSC2-225ENST00000569110 SMARCC2Q8TAQ2 1214 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 DHX36Q9H2U1 1008 aaKnown RBP19.43■□□□□ 0.7
TSC2-225ENST00000569110 MYOZ2Q9NPC6 264 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 IL17RBQ9NRM6 502 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 SERPINB13Q9UIV8 391 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 GJA3Q9Y6H8 435 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 EHD4Q9H223 541 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 TCP11L1Q9NUJ3 509 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 SLC12A7Q9Y666 1083 aa19.43■□□□□ 0.7
TSC2-225ENST00000569110 ATRNL1Q5VV63 1379 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 COL2A1P02458 1487 aaPredicted RBP19.42■□□□□ 0.7
TSC2-225ENST00000569110 CLRN2A0PK11 232 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 WNT10BO00744 389 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 ZBTB43O43298 467 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 RCSD1Q6JBY9 416 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 MYL10Q9BUA6 226 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 FAM217BQ9NTX9 383 aaPredicted RBP19.42■□□□□ 0.7
TSC2-225ENST00000569110 NID2Q14112 1375 aa19.42■□□□□ 0.7
TSC2-225ENST00000569110 BRD1O95696 1058 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 RXRAP19793 462 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 SYT1P21579 422 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 METAP2P50579 478 aaKnown RBP eCLIP19.41■□□□□ 0.71e-7■■■■■ 29
TSC2-225ENST00000569110 NBPF9Q3BBW0 867 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 FKBP1CQ5VVH2 108 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 MICU3Q86XE3 530 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 ZNF654Q8IZM8 581 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 ANKS1AQ92625 1134 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
TSC2-225ENST00000569110 TMOD2Q9NZR1 351 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 PI4KBQ9UBF8 816 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 SWAP70Q9UH65 585 aa19.41■□□□□ 0.7
TSC2-225ENST00000569110 CNOT7Q9UIV1 285 aaKnown RBP19.41■□□□□ 0.7
TSC2-225ENST00000569110 GREB1LQ9C091 1923 aaPredicted RBP19.41■□□□□ 0.7
TSC2-225ENST00000569110 EGFRP00533 1210 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 TSPY3P0CV98 308 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 TSPY8P0CW00 308 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 CDC27P30260 824 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 SHMT1P34896 483 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 RCAN1P53805 252 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 IFIT1BQ5T764 474 aaKnown RBP19.4■□□□□ 0.7
TSC2-225ENST00000569110 MICALL2Q8IY33 904 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 NEDD1Q8NHV4 660 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 CNTNAP1P78357 1384 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 TCP10L2B9ZVM9 353 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 DHX16O60231 1041 aaKnown RBP19.4■□□□□ 0.7
TSC2-225ENST00000569110 SLURP2P0DP57 97 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 ADD1P35611 737 aaKnown RBP19.4■□□□□ 0.7
TSC2-225ENST00000569110 SYNE3Q6ZMZ3 975 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 METTL16Q86W50 562 aaKnown RBP19.4■□□□□ 0.7
TSC2-225ENST00000569110 DGKHQ86XP1 1220 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 DNAJC18Q9H819 358 aa19.4■□□□□ 0.7
TSC2-225ENST00000569110 PTPDC1A2A3K4 754 aa19.39■□□□□ 0.69
TSC2-225ENST00000569110 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
TSC2-225ENST00000569110 CCDC178Q5BJE1 867 aa19.39■□□□□ 0.69
TSC2-225ENST00000569110 ZSCAN29Q8IWY8 852 aaPredicted RBP19.39■□□□□ 0.69
TSC2-225ENST00000569110 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
TSC2-225ENST00000569110 PLIN4Q96Q06 1357 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 STX6O43752 255 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 HMGN5P82970 282 aaKnown RBP19.38■□□□□ 0.69
TSC2-225ENST00000569110 TROAPQ12815 778 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 NTRK3Q16288 839 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 FOXP4Q8IVH2 680 aaPredicted RBP19.38■□□□□ 0.69
TSC2-225ENST00000569110 CCDC144CPQ8IYA2 1237 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 GPC2Q8N158 579 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 FAM151AQ8WW52 585 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 DDX11Q96FC9 970 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 TAOK2Q9UL54 1235 aa19.38■□□□□ 0.69
TSC2-225ENST00000569110 MYO1BO43795 1136 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 FDPSP14324 419 aaKnown RBP19.37■□□□□ 0.69
TSC2-225ENST00000569110 LARP1BQ659C4 914 aaKnown RBP19.37■□□□□ 0.69
TSC2-225ENST00000569110 DPY19L2Q6NUT2 758 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 SAMD7Q7Z3H4 446 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 FAM83AQ86UY5 434 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 FANCBQ8NB91 859 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 MYH6P13533 1939 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 TCHHQ07283 1943 aa19.37■□□□□ 0.69
TSC2-225ENST00000569110 AKR1B1P15121 316 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 NOVP48745 357 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 NFKBIBQ15653 356 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 RBM26Q5T8P6 1007 aaKnown RBP19.36■□□□□ 0.69
TSC2-225ENST00000569110 CATIPQ7Z7H3 387 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 ZNF526Q8TF50 670 aaPredicted RBP19.36■□□□□ 0.69
TSC2-225ENST00000569110 VEZTQ9HBM0 779 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 WDR33Q9C0J8 1336 aaKnown RBP19.36■□□□□ 0.69
TSC2-225ENST00000569110 IGKV6D-41A0A0C4DH26 115 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 CPLX1O14810 134 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 PPFIA3O75145 1194 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 PDCP20941 246 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 RTN1Q16799 776 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 TATDN1Q6P1N9 297 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 CRACR2BQ8N4Y2 399 aaPredicted RBP19.36■□□□□ 0.69
TSC2-225ENST00000569110 NUP133Q8WUM0 1156 aa19.36■□□□□ 0.69
TSC2-225ENST00000569110 PGAP2Q9UHJ9 254 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms