RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 USP40Q9NVE5 1235 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 FMNL1O95466 1100 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-212ENST00000568900 ZSCAN23Q3MJ62 389 aa24.3■■□□□ 1.48
SPNS1-212ENST00000568900 CCDC82Q8N4S0 544 aa24.3■■□□□ 1.48
SPNS1-212ENST00000568900 CRKP46108 304 aa24.3■■□□□ 1.48
SPNS1-212ENST00000568900 FKBP1AP62942 108 aaKnown RBP24.3■■□□□ 1.48
SPNS1-212ENST00000568900 ZNF444Q8N0Y2 327 aaPredicted RBP24.3■■□□□ 1.48
SPNS1-212ENST00000568900 SPATA32Q96LK8 384 aa24.3■■□□□ 1.48
SPNS1-212ENST00000568900 STK36Q9NRP7 1315 aa24.3■■□□□ 1.48
SPNS1-212ENST00000568900 GOLGA6L3A6NEY3 463 aa24.29■■□□□ 1.48
SPNS1-212ENST00000568900 UBE2Q2LH0YL09 131 aa24.29■■□□□ 1.48
SPNS1-212ENST00000568900 RTKN2Q8IZC4 609 aa24.29■■□□□ 1.48
SPNS1-212ENST00000568900 NT5C2P49902 561 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 GRIPAP1Q4V328 841 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 APOBEC3HQ6NTF7 200 aaKnown RBP24.28■■□□□ 1.48
SPNS1-212ENST00000568900 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
SPNS1-212ENST00000568900 TRIM22Q8IYM9 498 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 ZNF287Q9HBT7 754 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 ELP1O95163 1332 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 WDHD1O75717 1129 aaPredicted RBP24.28■■□□□ 1.48
SPNS1-212ENST00000568900 TSPY3P0CV98 308 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 TSPY8P0CW00 308 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 TROAPQ12815 778 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 CDC42EP5Q6NZY7 148 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 C16orf86Q6ZW13 317 aa24.28■■□□□ 1.48
SPNS1-212ENST00000568900 LEO1Q8WVC0 666 aaPredicted RBP24.28■■□□□ 1.48
SPNS1-212ENST00000568900 DDX4Q9NQI0 724 aaKnown RBP24.28■■□□□ 1.48
SPNS1-212ENST00000568900 CALM1P0DP23 149 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 CALM2P0DP24 149 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 CALM3P0DP25 149 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 RASA1P20936 1047 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 POLD1P28340 1107 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 CDK8P49336 464 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 PPP2R5BQ15173 497 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 NBPF11Q86T75 865 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 CRACR2BQ8N4Y2 399 aaPredicted RBP24.27■■□□□ 1.48
SPNS1-212ENST00000568900 IL17RBQ9NRM6 502 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 CFAP45Q9UL16 551 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 MYH6P13533 1939 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 FSD2A1L4K1 749 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 YDJCA8MPS7 323 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 DDAH1O94760 285 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 RCSD1Q6JBY9 416 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 MTFR1LQ9H019 292 aa24.27■■□□□ 1.48
SPNS1-212ENST00000568900 GUCY1A2P33402 732 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 CEBPZQ03701 1054 aaKnown RBP24.26■■□□□ 1.47
SPNS1-212ENST00000568900 ZDHHC15Q96MV8 337 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 RBM5P52756 815 aaKnown RBP eCLIP24.26■■□□□ 1.47
SPNS1-212ENST00000568900 KRT40Q6A162 431 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 WASF1Q92558 559 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 PSMD1Q99460 953 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 PCDHAC2Q9Y5I4 1007 aa24.26■■□□□ 1.47
SPNS1-212ENST00000568900 TRIM29Q14134 588 aa24.25■■□□□ 1.47
SPNS1-212ENST00000568900 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
SPNS1-212ENST00000568900 RGS22Q8NE09 1264 aa24.25■■□□□ 1.47
SPNS1-212ENST00000568900 FTOQ9C0B1 505 aaKnown RBP eCLIP24.25■■□□□ 1.47
SPNS1-212ENST00000568900 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
SPNS1-212ENST00000568900 RBM28Q9NW13 759 aaKnown RBP24.25■■□□□ 1.47
SPNS1-212ENST00000568900 KIF23Q02241 960 aaPredicted RBP24.24■■□□□ 1.47
SPNS1-212ENST00000568900 GAS2L3Q86XJ1 694 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 SYAP1Q96A49 352 aaPredicted RBP24.24■■□□□ 1.47
SPNS1-212ENST00000568900 ZNF396Q96N95 335 aaPredicted RBP24.24■■□□□ 1.47
SPNS1-212ENST00000568900 KAT14Q9H8E8 782 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 KIF28PB7ZC32 967 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 TGFB2P61812 414 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 DGKHQ86XP1 1220 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 MRIQ9BWK5 157 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 PIM2Q9P1W9 311 aa24.24■■□□□ 1.47
SPNS1-212ENST00000568900 PLEKHA8P1O95397 391 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 DEXIO95424 95 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 ZNF445P59923 1031 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 LARGE2Q8N3Y3 721 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 CTCFLQ8NI51 663 aaPredicted RBP24.23■■□□□ 1.47
SPNS1-212ENST00000568900 USP28Q96RU2 1077 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 PSME4Q14997 1843 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 HDLBPQ00341 1268 aaKnown RBP24.23■■□□□ 1.47
SPNS1-212ENST00000568900 CCDC178Q5BJE1 867 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 TCP11L1Q9NUJ3 509 aa24.23■■□□□ 1.47
SPNS1-212ENST00000568900 PPP1R1BQ9UD71 204 aaPredicted RBP24.23■■□□□ 1.47
SPNS1-212ENST00000568900 NFIAQ12857 509 aa24.22■■□□□ 1.47
SPNS1-212ENST00000568900 BRAPQ7Z569 592 aa24.22■■□□□ 1.47
SPNS1-212ENST00000568900 OSBPL5Q9H0X9 879 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-212ENST00000568900 GOLGA6L4A6NEF3 574 aa24.22■■□□□ 1.47
SPNS1-212ENST00000568900 L1TD1Q5T7N2 865 aaKnown RBP24.22■■□□□ 1.47
SPNS1-212ENST00000568900 ATL3Q6DD88 541 aa24.22■■□□□ 1.47
SPNS1-212ENST00000568900 RNF26Q9BY78 433 aaPredicted RBP24.22■■□□□ 1.47
SPNS1-212ENST00000568900 MYH8P13535 1937 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 SYCE3A1L190 88 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 AKAP17AQ02040 695 aaKnown RBP24.21■■□□□ 1.47
SPNS1-212ENST00000568900 PNMA1Q8ND90 353 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 ANKS1AQ92625 1134 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 SERPINA10Q9UK55 444 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 STX8Q9UNK0 236 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 CACNB3P54284 484 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 FUT2Q10981 343 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 GNL2Q13823 731 aaKnown RBP24.21■■□□□ 1.47
SPNS1-212ENST00000568900 TMTC3Q6ZXV5 915 aa24.21■■□□□ 1.47
SPNS1-212ENST00000568900 ISY1Q9ULR0 285 aaKnown RBP24.21■■□□□ 1.47
SPNS1-212ENST00000568900 COL4A5P29400 1685 aa24.2■■□□□ 1.46
SPNS1-212ENST00000568900 SOGA3Q5TF21 947 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms