RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 STAG1Q8WVM7 1258 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 CCDC17Q96LX7 622 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 INCENPQ9NQS7 918 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 PICK1Q9NRD5 415 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 GINM1Q9NU53 330 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.87■□□□□ 0.77
COMMD4-224ENST00000568877 TACC3Q9Y6A5 838 aa19.87■□□□□ 0.77
COMMD4-224ENST00000568877 EIF5BO60841 1220 aaKnown RBP19.86■□□□□ 0.77
COMMD4-224ENST00000568877 ASNSP08243 561 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 PCP11498 1178 aaKnown RBP19.86■□□□□ 0.77
COMMD4-224ENST00000568877 RASA1P20936 1047 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 NECTIN1Q15223 517 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 MFSD6Q6ZSS7 791 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 TBC1D10CQ8IV04 446 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 ZNF444Q8N0Y2 327 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-224ENST00000568877 RNF41Q9H4P4 317 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-224ENST00000568877 CABP5Q9NP86 173 aa19.86■□□□□ 0.77
COMMD4-224ENST00000568877 MPHOSPH10O00566 681 aaKnown RBP19.85■□□□□ 0.77
COMMD4-224ENST00000568877 EPB41L2O43491 1005 aaKnown RBP19.85■□□□□ 0.77
COMMD4-224ENST00000568877 ORC4O43929 436 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 GH2P01242 217 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 AKR1B1P15121 316 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 PTPRAP18433 802 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 SHROOM1Q2M3G4 852 aaPredicted RBP19.85■□□□□ 0.77
COMMD4-224ENST00000568877 CREB3L3Q68CJ9 461 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 ERO1BQ86YB8 467 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 ZBTB21Q9ULJ3 1066 aa19.85■□□□□ 0.77
COMMD4-224ENST00000568877 OTOFQ9HC10 1997 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 SPDYE5A6NIY4 337 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 SLC27A2O14975 620 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 PAXIP1Q6ZW49 1069 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-224ENST00000568877 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 OPTNQ96CV9 577 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 TOMM22Q9NS69 142 aa19.84■□□□□ 0.77
COMMD4-224ENST00000568877 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-224ENST00000568877 PPATQ06203 517 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 RRP12Q5JTH9 1297 aaKnown RBP19.83■□□□□ 0.77
COMMD4-224ENST00000568877 RNF20Q5VTR2 975 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 CYP4F22Q6NT55 531 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 TMEM179Q6ZVK1 233 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 RASAL3Q86YV0 1011 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 WNK4Q96J92 1243 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 USP26Q9BXU7 913 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 TAF6LQ9Y6J9 622 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 ZHX2Q9Y6X8 837 aa19.83■□□□□ 0.77
COMMD4-224ENST00000568877 NEDD4P46934 1319 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 LAMA4Q16363 1823 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 USP17L5A8MUK1 530 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 RANBP6O60518 1105 aaKnown RBP19.82■□□□□ 0.76
COMMD4-224ENST00000568877 SEC24BO95487 1268 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 SLC10A3P09131 477 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 GUCY1A2P33402 732 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 TFAP4Q01664 338 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 SEPT2Q15019 361 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 RAB3GAP1Q15042 981 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 FAM47AQ5JRC9 791 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 SPRYD7Q5W111 196 aa19.82■□□□□ 0.76
COMMD4-224ENST00000568877 TSPY2A6NKD2 308 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 FAM155AB1AL88 458 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-224ENST00000568877 E7EWF7 191 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 TSPY3P0CV98 308 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 TSPY8P0CW00 308 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 ZBTB48P10074 688 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-224ENST00000568877 HSPA4P34932 840 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 GJA5P36382 358 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 ECE1P42892 770 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 NT5C2P49902 561 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 PPIL2Q13356 520 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 CCDC84Q86UT8 332 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-224ENST00000568877 NEDD1Q8NHV4 660 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 ESR2Q92731 530 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 CAPNS2Q96L46 248 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.81■□□□□ 0.76
COMMD4-224ENST00000568877 TBC1D2Q9BYX2 928 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 KRT23Q9C075 422 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 CNNM2Q9H8M5 875 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 DOCK1Q14185 1865 aa19.81■□□□□ 0.76
COMMD4-224ENST00000568877 TRDNQ13061 729 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 MKRN3Q13064 507 aaKnown RBP19.8■□□□□ 0.76
COMMD4-224ENST00000568877 GRM1Q13255 1194 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 KCNB2Q92953 911 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 WDR18Q9BV38 432 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 AS3MTQ9HBK9 375 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 AFG3L2Q9Y4W6 797 aa19.8■□□□□ 0.76
COMMD4-224ENST00000568877 B4E1Z4 1266 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 IRF6O14896 467 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 ZKSCAN1P17029 563 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-224ENST00000568877 TSGA10IPQ3SY00 556 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 STOX1Q6ZVD7 989 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 ZNF280CQ8ND82 737 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 NKX2-3Q8TAU0 364 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 KANSL2Q9H9L4 492 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 PLIN4Q96Q06 1357 aa19.79■□□□□ 0.76
COMMD4-224ENST00000568877 WDR33Q9C0J8 1336 aaKnown RBP19.78■□□□□ 0.76
COMMD4-224ENST00000568877 IGKV6D-41A0A0C4DH26 115 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 KDM4AO75164 1064 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 MCCP23508 829 aa19.78■□□□□ 0.76
COMMD4-224ENST00000568877 VEGFBP49765 207 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms