RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 HTTP42858 3142 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 RBBP6Q7Z6E9 1792 aaKnown RBP9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 RLFQ13129 1914 aa9.88□□□□□ -0.83
HDGFL3-205ENST00000568129 PARP14Q460N5 1801 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 C19orf81C9J6K1 198 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 PDHXO00330 501 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 RNF113AO15541 343 aaKnown RBP9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 MBD4O95243 580 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 BCRP11274 1271 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 HOXA7P31268 230 aaPredicted RBP9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 RGS19P49795 217 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 NUCB1Q02818 461 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 SBK1Q52WX2 424 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 C12orf60Q5U649 245 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 TSHZ3Q63HK5 1081 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 FBXO46Q6PJ61 603 aaPredicted RBP9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 OTOP1Q7RTM1 612 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 SDR42E1Q8WUS8 393 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 ARMT1Q9H993 441 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 AS3MTQ9HBK9 375 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 ZBTB21Q9ULJ3 1066 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 AGTPBP1Q9UPW5 1226 aa9.87□□□□□ -0.83
HDGFL3-205ENST00000568129 GSG1L2A8MUP6 293 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 PRKAB2O43741 272 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 GNRH1P01148 92 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 GUCY1A2P33402 732 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 BACE1P56817 501 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 SPP2Q13103 211 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 LRRFIP1Q32MZ4 808 aaKnown RBP9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 ZMYM1Q5SVZ6 1142 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 CRACR2BQ8N4Y2 399 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 C12orf42Q96LP6 360 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 MCM9Q9NXL9 1143 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 SWAP70Q9UH65 585 aa9.86□□□□□ -0.83
HDGFL3-205ENST00000568129 KIAA0100Q14667 2235 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 TRIM75PA6NK02 468 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 PATL2C9JE40 543 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 POLR3DP05423 398 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 GNAT2P19087 354 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 LACTBP83111 547 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 EVX2Q03828 476 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 SHROOM1Q2M3G4 852 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CERKLQ49MI3 558 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CTR9Q6PD62 1173 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 C16orf86Q6ZW13 317 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CCDC84Q86UT8 332 aaPredicted RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 PLEKHM2Q8IWE5 1019 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CD99L2Q8TCZ2 262 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 PARK7Q99497 189 aaKnown RBP9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 PTPN22Q9Y2R2 807 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 MYH4Q9Y623 1939 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 CENPFP49454 3210 aa9.85□□□□□ -0.83
HDGFL3-205ENST00000568129 PLXNB2O15031 1838 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 ZNFX1Q9P2E3 1918 aaKnown RBP9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 USP17L10C9JJH3 530 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 USP17L12C9JPN9 530 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 USP17L21D6R901 530 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 GDF11O95390 407 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 GH2P01242 217 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 CTGFP29279 349 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 PRMT2P55345 433 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 ARHGEF6Q15052 776 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 ABCB5Q2M3G0 1257 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 TREML2Q5T2D2 321 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 SIAH1Q8IUQ4 282 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 CCDC17Q96LX7 622 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 KIAA1683Q9H0B3 1180 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 EMILIN3Q9NT22 766 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 SLC4A4Q9Y6R1 1079 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 ROBO3Q96MS0 1386 aa9.84□□□□□ -0.83
HDGFL3-205ENST00000568129 SMIM22K7EJ46 135 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 M0R2C6 588 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 FOXP2O15409 715 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 GPAA1O43292 621 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 CYP2C8P10632 490 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 CYP2D6P10635 497 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 HMGCS2P54868 508 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 MTMR2Q13614 643 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 USP17L2Q6R6M4 530 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 GADL1Q6ZQY3 521 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 ARMC5Q96C12 935 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 TRIM34Q9BYJ4 488 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 BCL11AQ9H165 835 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 EPB41L4AQ9HCS5 686 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 ARPP21Q9UBL0 812 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 ZBTB47Q9UFB7 747 aaPredicted RBP9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 PNMA3Q9UL41 463 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 TRIM17Q9Y577 477 aa9.83□□□□□ -0.84
HDGFL3-205ENST00000568129 GCLCP48506 637 aaPredicted RBP9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 CDK8P49336 464 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 USP14P54578 494 aa9.82□□□□□ -0.84
HDGFL3-205ENST00000568129 ALX1Q15699 326 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms