RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, human

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH5-206	ENST00000568023	CCDC196	A0A1B0GTZ2	297 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	GOLGA8A	A7E2F4	631 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	POTEC	B2RU33	542 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	STX6	O43752	255 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	PRDM1	O75626	825 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	TSPY3	P0CV98	308 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	TSPY8	P0CW00	308 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	CALM1	P0DP23	149 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	CALM2	P0DP24	149 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	CALM3	P0DP25	149 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	CCT2	P78371	535 aa	Known RBP	13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	ST3GAL1	Q11201	340 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	NFKBIB	Q15653	356 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	KIF4B	Q2VIQ3	1234 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	SLC4A8	Q2Y0W8	1093 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	SPDYE2	Q495Y8	402 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	IFIT1B	Q5T764	474 aa	Known RBP	13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	APOA5	Q6Q788	366 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	TNPO1	Q92973	898 aa	Known RBP	13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	ZKSCAN3	Q9BRR0	538 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	IDI2	Q9BXS1	227 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	TRIM34	Q9BYJ4	488 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	SWAP70	Q9UH65	585 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	BRPF3	Q9ULD4	1205 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	ATP6V1D	Q9Y5K8	247 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	TACC3	Q9Y6A5	838 aa		13.2	□□□□□ -0.3
CDH5-206	ENST00000568023	MYH15	Q9Y2K3	1946 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	PTPDC1	A2A3K4	754 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	DDX11L8	A8MPP1	907 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023		H7C1D1	291 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	MYO1B	O43795	1136 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	BRD1	O95696	1058 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	PPP2R5B	Q15173	497 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	NBPF9	Q3BBW0	867 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	FKBP1C	Q5VVH2	108 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	LARP1B	Q659C4	914 aa	Known RBP	13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	SAMD7	Q7Z3H4	446 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	CATIP	Q7Z7H3	387 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	MICU3	Q86XE3	530 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	TRPM4	Q8TD43	1214 aa		13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	TDRD3	Q9H7E2	651 aa	Known RBP	13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	DDX4	Q9NQI0	724 aa	Known RBP	13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	GPHN	Q9NQX3	736 aa	Predicted RBP	13.19	□□□□□ -0.3
CDH5-206	ENST00000568023	GREB1L	Q9C091	1923 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ENTPD3	O75355	529 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	SYT1	P21579	422 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	LMOD1	P29536	600 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	CDK8	P49336	464 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	PLCD1	P51178	756 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	HIRA	P54198	1017 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	TFAP4	Q01664	338 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	SEC23A	Q15436	765 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	PPP4R3B	Q5MIZ7	849 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ZNF654	Q8IZM8	581 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ENAH	Q8N8S7	591 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	NSUN7	Q8NE18	718 aa	Known RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	SMARCC2	Q8TAQ2	1214 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	DYNLL2	Q96FJ2	89 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	EHD4	Q9H223	541 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ADARB2	Q9NS39	739 aa	Known RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ZNF70	Q9UC06	446 aa	Predicted RBP	13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	FAM198A	Q9UFP1	575 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	SERPINB13	Q9UIV8	391 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	CNTNAP1	P78357	1384 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	ATRNL1	Q5VV63	1379 aa		13.18	□□□□□ -0.3
CDH5-206	ENST00000568023	UTRN	P46939	3433 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	PAPPA2	Q9BXP8	1791 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	VPS37C	A5D8V6	355 aa	Predicted RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023		H3BQV1	296 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	DDAH1	O94760	285 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	ZSCAN22	P10073	491 aa	Predicted RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	NFIA	Q12857	509 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	NBR1	Q14596	966 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	RTN1	Q16799	776 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	FAM47A	Q5JRC9	791 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	IFFO2	Q5TF58	517 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	CLEC17A	Q6ZS10	378 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	KAT14	Q9H8E8	782 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	NCOA5	Q9HCD5	579 aa	Known RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	TCP11L1	Q9NUJ3	509 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	RBM28	Q9NW13	759 aa	Known RBP	13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	HACL1	Q9UJ83	578 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	HPS5	Q9UPZ3	1129 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	PLIN4	Q96Q06	1357 aa		13.17	□□□□□ -0.3
CDH5-206	ENST00000568023	ASTN2	O75129	1339 aa	Predicted RBP	13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	PITPNM2	Q9BZ72	1349 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	ATAD5	Q96QE3	1844 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	MYH4	Q9Y623	1939 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	IQCA1L	A6NCM1	817 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	JAK2	O60674	1132 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	RASA1	P20936	1047 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	CACNB3	P54284	484 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	FAM83A	Q86UY5	434 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	DGKH	Q86XP1	1220 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	DDX11	Q96FC9	970 aa		13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.16	□□□□□ -0.3
CDH5-206	ENST00000568023	PI4KB	Q9UBF8	816 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms