RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 TXNRD2Q9NNW7 524 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 DDX4Q9NQI0 724 aaKnown RBP17.24■□□□□ 0.35
SMG1-213ENST00000567737 TMOD4Q9NZQ9 345 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 FRMPD3Q5JV73 1810 aa17.24■□□□□ 0.35
SMG1-213ENST00000567737 SYNGAP1Q96PV0 1343 aa17.23■□□□□ 0.35
SMG1-213ENST00000567737 MYH13Q9UKX3 1938 aa17.23■□□□□ 0.35
SMG1-213ENST00000567737 MRPS5P82675 430 aaKnown RBP17.23■□□□□ 0.35
SMG1-213ENST00000567737 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
SMG1-213ENST00000567737 LPIN2Q92539 896 aa17.23■□□□□ 0.35
SMG1-213ENST00000567737 GAS2L1Q99501 681 aaPredicted RBP17.23■□□□□ 0.35
SMG1-213ENST00000567737 BICC1Q9H694 974 aaKnown RBP17.23■□□□□ 0.35
SMG1-213ENST00000567737 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
SMG1-213ENST00000567737 HCN4Q9Y3Q4 1203 aa17.23■□□□□ 0.35
SMG1-213ENST00000567737 ARIH1Q9Y4X5 557 aaPredicted RBP17.23■□□□□ 0.35
SMG1-213ENST00000567737 GAKO14976 1311 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 SALL1Q9NSC2 1324 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 FAM196BA6NMK8 535 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 DNAJB2P25686 324 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
SMG1-213ENST00000567737 ERVK-9P63128 1117 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 ERVK-24P63145 666 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 RABL6Q3YEC7 729 aaPredicted RBP17.22■□□□□ 0.35
SMG1-213ENST00000567737 SLC4A10Q6U841 1118 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 PORCNQ9H237 461 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 ZNF576Q9H609 170 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 PDLIM7Q9NR12 457 aa17.22■□□□□ 0.35
SMG1-213ENST00000567737 UTYO14607 1347 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 KBTBD13C9JR72 458 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 NBPF7P0C2Y1 421 aaPredicted RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 CAP2P40123 477 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 MTMR2Q13614 643 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 TRIM60Q495X7 471 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 GJC2Q5T442 439 aaPredicted RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 DZIP1Q86YF9 867 aaKnown RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 SLF2Q8IX21 1173 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 ARRDC4Q8NCT1 418 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 GTF3C2Q8WUA4 911 aaPredicted RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
SMG1-213ENST00000567737 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 RBPJLQ9UBG7 517 aa17.21■□□□□ 0.35
SMG1-213ENST00000567737 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.2■□□□□ 0.34
SMG1-213ENST00000567737 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.2■□□□□ 0.34
SMG1-213ENST00000567737 VAMP4O75379 141 aa17.2■□□□□ 0.34
SMG1-213ENST00000567737 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
SMG1-213ENST00000567737 BTDP43251 543 aa17.2■□□□□ 0.34
SMG1-213ENST00000567737 Q3C1V9 767 aa17.2■□□□□ 0.34
SMG1-213ENST00000567737 KLHDC4Q8TBB5 520 aa17.2■□□□□ 0.34
SMG1-213ENST00000567737 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
SMG1-213ENST00000567737 TRIM43BA6NCK2 446 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 BACE1P56817 501 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 ATP2B2Q01814 1243 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 AKNAD1Q5T1N1 836 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 SH3RF1Q7Z6J0 888 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 TRIM43Q96BQ3 446 aaPredicted RBP17.19■□□□□ 0.34
SMG1-213ENST00000567737 TIFAQ96CG3 184 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 FLRT1Q9NZU1 646 aa17.19■□□□□ 0.34
SMG1-213ENST00000567737 SEMA3EO15041 775 aa17.18■□□□□ 0.34
SMG1-213ENST00000567737 SNX17Q15036 470 aa17.18■□□□□ 0.34
SMG1-213ENST00000567737 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
SMG1-213ENST00000567737 WDR18Q9BV38 432 aa17.18■□□□□ 0.34
SMG1-213ENST00000567737 CCNA1P78396 465 aa17.17■□□□□ 0.34
SMG1-213ENST00000567737 WDR78Q5VTH9 848 aa17.17■□□□□ 0.34
SMG1-213ENST00000567737 POTEEQ6S8J3 1075 aa17.17■□□□□ 0.34
SMG1-213ENST00000567737 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
SMG1-213ENST00000567737 TACC3Q9Y6A5 838 aa17.17■□□□□ 0.34
SMG1-213ENST00000567737 MYH2Q9UKX2 1941 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 C19orf81C9J6K1 198 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 CYP2C19P33261 490 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 RRP1BQ14684 758 aaKnown RBP17.16■□□□□ 0.34
SMG1-213ENST00000567737 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 NDUFB9Q9Y6M9 179 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 IL16Q14005 1332 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 FANCIQ9NVI1 1328 aa17.16■□□□□ 0.34
SMG1-213ENST00000567737 RLFQ13129 1914 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 ATAD5Q96QE3 1844 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 USP17L10C9JJH3 530 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 EYA2O00167 538 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 EPHB4P54760 987 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 FPGSQ05932 587 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 C1orf53Q5VUE5 145 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 HERC5Q9UII4 1024 aaKnown RBP17.15■□□□□ 0.34
SMG1-213ENST00000567737 IVNS1ABPQ9Y6Y0 642 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 MROH7-TTC4A0A0A0MT08 1334 aa17.15■□□□□ 0.34
SMG1-213ENST00000567737 ASNSP08243 561 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 CLTBP09497 229 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 CYBAP13498 195 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 RAG1P15918 1043 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 PTPREP23469 700 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 TLE2Q04725 743 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 CCDC85BQ15834 202 aaPredicted RBP17.14■□□□□ 0.33
SMG1-213ENST00000567737 ATP2B3Q16720 1220 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 TRPV1Q8NER1 839 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 PRDM12Q9H4Q4 367 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms