RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 PCDHA5Q9Y5H7 936 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ENC1O14682 589 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ATP2A1O14983 1001 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ACTN4O43707 911 aaKnown RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 FBXO18Q8NFZ0 1043 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 CUL5Q93034 780 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 HAUS4Q9H6D7 363 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ANKIB1Q9P2G1 1089 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 MORC2Q9Y6X9 1032 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 MAP3K19Q56UN5 1328 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ARAP3Q8WWN8 1544 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 GPAA1O43292 621 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 PLCB3Q01970 1234 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 TSNAXIP1Q2TAA8 658 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 SPATS2Q86XZ4 545 aaKnown RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 LRRC59Q96AG4 307 aaKnown RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 JPH2Q9BR39 696 aaPredicted RBP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 DDX21Q9NR30 783 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 ATP6V0A2Q9Y487 856 aa13.84□□□□□ -0.19
CSPG4P13-202ENST00000567704 RPSAP08865 295 aaKnown RBP13.83□□□□□ -0.19
CSPG4P13-202ENST00000567704 ZSCAN20P17040 1043 aaPredicted RBP13.83□□□□□ -0.19
CSPG4P13-202ENST00000567704 GBP1P32455 592 aa13.83□□□□□ -0.19
CSPG4P13-202ENST00000567704 IFT88Q13099 833 aa13.83□□□□□ -0.19
CSPG4P13-202ENST00000567704 EAF2Q96CJ1 260 aaPredicted RBP13.83□□□□□ -0.19
CSPG4P13-202ENST00000567704 MBD4O95243 580 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 CLTAP09496 248 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 CTNNA1P35221 906 aaKnown RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 E2F5Q15329 346 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 CCDC38Q502W7 563 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 TTC38Q5R3I4 469 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 MBD5Q9P267 1494 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 DCAF17Q5H9S7 520 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 ABCC1P33527 1531 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 SCRN1Q12765 414 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 TBC1D31Q96DN5 1066 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 ZNF274Q96GC6 653 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 C6orf50Q9HD87 102 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 EPN1Q9Y6I3 576 aaPredicted RBP13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
CSPG4P13-202ENST00000567704 PLCD1P51178 756 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 NFATC2IPQ8NCF5 419 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 APPBP2Q92624 585 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 CASP14P31944 242 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 SNCBQ16143 134 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 LETM2Q2VYF4 491 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 GKAP1Q5VSY0 366 aaPredicted RBP13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 TMEM87AQ8NBN3 555 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 GNAT2P19087 354 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 MAGEA9P43362 315 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 NEDD9Q14511 834 aa13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 ARHGEF2Q92974 986 aaKnown RBP13.82□□□□□ -0.2
CSPG4P13-202ENST00000567704 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 CASP8Q14790 479 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 ZNF652Q9Y2D9 606 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 KCNJ18B7U540 433 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 SLC8A1P32418 973 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 ADD1P35611 737 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 RRAGAQ7L523 313 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 CDC5LQ99459 802 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 MAGEB6P1A0A0J9YX57 407 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 EYA2O00167 538 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 BAG3O95817 575 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 PPP1R2P41236 205 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 TNNI2P48788 182 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 NAP1L3Q99457 506 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 NLRC4Q9NPP4 1024 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 RBM28Q9NW13 759 aaKnown RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 TSPOAP1O95153 1857 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 USP27XA6NNY8 438 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 ATP5DP30049 168 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 MTMR3Q13615 1198 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 CCDC144BQ3MJ40 725 aa13.81□□□□□ -0.2
CSPG4P13-202ENST00000567704 AP1ARQ63HQ0 302 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms