RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 GDF11O95390 407 aa18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 USP5P45974 858 aa18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 MTMR2Q13614 643 aa18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 SLAIN1Q8ND83 568 aa18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 CHMP4BQ9H444 224 aaKnown RBP18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 ZBTB21Q9ULJ3 1066 aa18.32■□□□□ 0.52
SCAMP2-209ENST00000567638 MKI67P46013 3256 aaKnown RBP18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 GCLCP48506 637 aaPredicted RBP18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 BACE1P56817 501 aa18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 TTF1Q15361 905 aaPredicted RBP18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 SHROOM1Q2M3G4 852 aaPredicted RBP18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 ASCC2Q9H1I8 757 aaPredicted RBP18.31■□□□□ 0.52
SCAMP2-209ENST00000567638 IFIT2P09913 472 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 FLT3LGP49771 235 aa18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 UBXN2AP68543 259 aa18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 SHISA4Q96DD7 197 aa18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 RIOK1Q9BRS2 568 aaKnown RBP18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 BIN2Q9UBW5 565 aaPredicted RBP18.3■□□□□ 0.52
SCAMP2-209ENST00000567638 BAZ2AQ9UIF9 1905 aaKnown RBP18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 C19orf81C9J6K1 198 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 ADCY3O60266 1144 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 CCL5P13501 91 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 IRF5Q13568 498 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 NKX2-3Q8TAU0 364 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 COA7Q96BR5 231 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 EHD4Q9H223 541 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 TMOD4Q9NZQ9 345 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 SERPINB13Q9UIV8 391 aa18.29■□□□□ 0.52
SCAMP2-209ENST00000567638 MAGEB6P1A0A0J9YX57 407 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 USP17L10C9JJH3 530 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 GJB1P08034 283 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 PDE6AP16499 860 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 IRX3P78415 501 aaPredicted RBP18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 TATDN1Q6P1N9 297 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 TTC6Q86TZ1 520 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 PXYLP1Q8TE99 480 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 DNAJC2Q99543 621 aaKnown RBP18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 RNF208Q9H0X6 261 aa18.28■□□□□ 0.52
SCAMP2-209ENST00000567638 GOLIM4O00461 696 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 GH2P01242 217 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 ELNP15502 786 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 HOXA7P31268 230 aaPredicted RBP18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 GJA8P48165 433 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 GCC1Q96CN9 775 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 MORF4L1Q9UBU8 362 aa18.27■□□□□ 0.52
SCAMP2-209ENST00000567638 INHAP05111 366 aa18.26■□□□□ 0.51
SCAMP2-209ENST00000567638 PDE3AQ14432 1141 aa18.26■□□□□ 0.51
SCAMP2-209ENST00000567638 C20orf194Q5TEA3 1177 aa18.26■□□□□ 0.51
SCAMP2-209ENST00000567638 BCL11AQ9H165 835 aa18.26■□□□□ 0.51
SCAMP2-209ENST00000567638 UNC93B1Q9H1C4 597 aa18.26■□□□□ 0.51
SCAMP2-209ENST00000567638 ZNF532Q9HCE3 1301 aa18.25■□□□□ 0.51
SCAMP2-209ENST00000567638 TCRBV5S4A2TA0A5A2 114 aa18.25■□□□□ 0.51
SCAMP2-209ENST00000567638 EDC3Q96F86 508 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-209ENST00000567638 CRNKL1Q9BZJ0 848 aaKnown RBP18.25■□□□□ 0.51
SCAMP2-209ENST00000567638 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
SCAMP2-209ENST00000567638 PLCD1P51178 756 aa18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 HERVK_113P62684 666 aa18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 CERKLQ49MI3 558 aaPredicted RBP18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 USP17L2Q6R6M4 530 aa18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 EMILIN3Q9NT22 766 aa18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 PAG1Q9NWQ8 432 aa18.24■□□□□ 0.51
SCAMP2-209ENST00000567638 POLR3DP05423 398 aaPredicted RBP18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 ATP5JP18859 108 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 SHMT1P34896 483 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 ABCB5Q2M3G0 1257 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 LCORLQ8N3X6 602 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 C12orf42Q96LP6 360 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 FEZ1Q99689 392 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 BOLA2Q9H3K6 86 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 TXNRD2Q9NNW7 524 aa18.23■□□□□ 0.51
SCAMP2-209ENST00000567638 GABPAQ06546 454 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 RAB3GAP1Q15042 981 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 UBE2Q1Q7Z7E8 422 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 GTF3C2Q8WUA4 911 aaPredicted RBP18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 HAUS7Q99871 368 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 GJD2Q9UKL4 321 aa18.22■□□□□ 0.51
SCAMP2-209ENST00000567638 ALPK3Q96L96 1907 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 PEX10O60683 326 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 SGPL1O95470 568 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 ADD2P35612 726 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 ZYXQ15942 572 aaKnown RBP18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 GPRC5AQ8NFJ5 357 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 LRRCC1Q9C099 1032 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 CABP5Q9NP86 173 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 DCP1AQ9NPI6 582 aaPredicted RBP18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 PAK6Q9NQU5 681 aaPredicted RBP18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 RBPJLQ9UBG7 517 aa18.21■□□□□ 0.51
SCAMP2-209ENST00000567638 HMGCRP04035 888 aa18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 USP14P54578 494 aa18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 EVX2Q03828 476 aa18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 KIAA1683Q9H0B3 1180 aa18.2■□□□□ 0.5
SCAMP2-209ENST00000567638 ARMT1Q9H993 441 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms